RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 PdgfcQ8CI19 345 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Card14Q99KF0 999 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Pkp2Q9CQ73 795 aaKnown RBP27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Znf704Q9ERQ3 566 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Rnf103Q9R1W3 683 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 GclmO09172 274 aaKnown RBP27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Drp2Q05AA6 957 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Abi3bpQ59IW6 1179 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 FdxrQ61578 494 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Irak1Q62406 710 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Pla2g4cQ64GA5 597 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Spag5Q7TME2 1165 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Bmp3Q8BHE5 468 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Cdkn2aipQ8BI72 563 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Ago2Q8CJG0 860 aaKnown RBP27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 MyocdQ8VIM5 935 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Adgrf4Q9D2L6 698 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 MicalclQ9D5U9 680 aa27.89■■■□□ 2.06
Tpm1-216ENSMUST00000113707 CiitaP79621 1155 aa27.89■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Pacsin1Q61644 441 aa27.89■■■□□ 2.05
Tpm1-216ENSMUST00000113707 GlmnQ8BZM1 596 aa27.89■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Fbxo43Q8CDI2 640 aa27.89■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Olfr390Q8VEZ7 311 aa27.89■■■□□ 2.05
Tpm1-216ENSMUST00000113707 H2-OaQ9QWV1 250 aa27.89■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Efna5O08543 228 aa27.88■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Dync1i1O88485 628 aa27.88■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Ddx3xQ62167 662 aaKnown RBP27.88■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Slc13a4Q8BZ82 625 aa27.88■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Prl7b1Q8CGZ9 251 aa27.88■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Trp53inp1Q9QXE4 239 aa27.88■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Tmigd3G3X8R9 209 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Pik3caP42337 1068 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Tubb4bP68372 445 aaKnown RBP27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Kctd6Q8BNL5 237 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Pop1Q8K205 1045 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Upb1Q8VC97 393 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Psmd6Q99JI4 389 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 ThegQ9JMB1 375 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 DmpkP54265 631 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Cdr2P97817 455 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Fam189a2Q4FZH1 290 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Krit1Q6S5J6 736 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Znf579Q80VM4 562 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Elac2Q80Y81 831 aaKnown RBP27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Klhl36Q8R124 613 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Rbm31yQ9D3U4 565 aa27.87■■■□□ 2.05
Tpm1-216ENSMUST00000113707 NrcamQ810U4 1256 aa27.86■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Trim65Q8BFW4 522 aa27.86■■■□□ 2.05
Tpm1-216ENSMUST00000113707 AsphQ8BSY0 741 aa27.86■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Me2Q99KE1 589 aa27.86■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Sppl3Q9CUS9 384 aa27.86■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Cep72Q9D3R3 646 aa27.86■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Spata17Q9D552 379 aa27.86■■■□□ 2.05
Tpm1-216ENSMUST00000113707 TxnP10639 105 aaKnown RBP27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Sin3bQ62141 1098 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Zcchc2Q69ZB8 1166 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Depdc1bQ8BH88 529 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Osbpl2Q8BX94 484 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Matr3Q8K310 846 aaKnown RBP27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Nmrk1Q91W63 195 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 PdclQ9DBX2 301 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Sv2aQ9JIS5 742 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 HunkO88866 714 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 H2afzP0C0S6 128 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Alkbh1P0CB42 389 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Myo1fP70248 1099 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Mex3cQ05A36 652 aaKnown RBP27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 H2afvQ3THW5 128 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Znhit6Q3UFB2 460 aaKnown RBP27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 LbpQ61805 481 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Cdc14aQ6GQT0 603 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Pxylp1Q8BHA9 480 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 LarsQ8BMJ2 1178 aa27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Cdc42ep4Q9JM96 349 aaKnown RBP27.85■■■□□ 2.05
Tpm1-216ENSMUST00000113707 FechP22315 420 aaKnown RBP27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Gna15P30678 374 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Igfbp4P47879 254 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Polr2fP61219 127 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Muc1Q02496 630 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Nat8lQ3UGX3 299 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Znf219Q6IQX8 726 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Tas2r134Q7TQB0 298 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Q8CEZ4 452 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Lrrc56Q8K375 552 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Pcdha2Q91Y17 948 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Srgap2Q91Z67 1071 aa27.84■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Btbd18A0A0A6YY25 723 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Sclt1G5E861 688 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Zfp457L7N1X4 647 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 H2afxP27661 143 aaKnown RBP27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Rnf157Q3TEL6 685 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Rhox12Q4TU81 186 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Kansl1lQ5DTI6 991 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Mcf2lQ64096 1149 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Ankfy1Q810B6 1169 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Tas1r1Q99PG6 842 aa27.83■■■□□ 2.05
Tpm1-216ENSMUST00000113707 Rnf113a2Q14B01 337 aa27.83■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Gm5935Q497S0 212 aa27.83■■■□□ 2.04
Tpm1-216ENSMUST00000113707 NfrkbQ6PIJ4 1296 aaKnown RBP27.83■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Kat5Q8CHK4 513 aa27.83■■■□□ 2.04
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms