RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Nkx1-1G3UXB3 402 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Prl6a1O35257 230 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Rpl13P47963 211 aaKnown RBP13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 HmgcrQ01237 887 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Zc3h18Q0P678 948 aaKnown RBP13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Frmd8Q3UFK8 466 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 R3hdm4Q4VBF2 262 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Elf1Q60775 612 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Znf532Q6NXK2 1036 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 SucoQ8C341 1250 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Klhl30Q8C3F7 581 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 FcrlaQ920A9 352 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Q922R1 422 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 EcsitQ9QZH6 435 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Arid2E9Q7E2 1828 aa13.33□□□□□ -0.27
Ddx55-202ENSMUST00000111438 Ptpn11P35235 597 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Elac2Q80Y81 831 aaKnown RBP13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Fam49aQ8BHZ0 323 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 D130040H23RikQ8BII3 405 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ints4Q8CIM8 964 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Sgpl1Q8R0X7 568 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Olfr1494Q8VGP8 315 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Copb1Q9JIF7 953 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Hs6st3Q9QYK4 470 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gyg1Q9R062 333 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Knop1Q9Z2Q2 478 aaKnown RBP13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm8909G3UXE9 396 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Chrna9G3X8Z7 479 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Kng1O08677 661 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Tnfrsf11aO35305 625 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Chrm1P12657 460 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Fmr1P35922 614 aaKnown RBP13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Tpm1P58771 284 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 PrkcbP68404 671 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Tcaf3Q6QR59 914 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Drc7Q6V3W6 876 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mapk15Q80Y86 549 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Sgms1Q8VCQ6 419 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mical1Q8VDP3 1048 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Sorbs3Q9R1Z8 733 aa13.33□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Rnf19bA2A7Q9 732 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ccdc152E9PX14 254 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 GlrbP48168 496 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cyp2c38P56655 490 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pdrg1P59048 133 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Anp32eP97822 260 aaKnown RBP13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 GscQ02591 256 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mpzl3Q3V3F6 237 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Asap3Q5U464 904 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ankrd24Q80VM7 985 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 HomezQ80W88 542 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Zbed4Q80WQ9 1168 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cep95Q8BVV7 827 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Traf3ip3Q8C0G2 513 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ppp1r16bQ8VHQ3 568 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pbx4Q99NE9 378 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Hspbp1Q99P31 357 aaKnown RBP13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Galnt15Q9D2N8 638 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Wnt8bQ9WUD6 350 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mettl1Q9Z120 268 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 SprtnG3X912 497 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Btg4O70552 250 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 MybP06876 636 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 GcP21614 476 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pnpla5Q32LZ8 432 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Klra7Q60654 280 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Slu7Q8BHJ9 585 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ablim1Q8K4G5 861 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Smc1bQ920F6 1248 aa13.32□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Etnk2A7MCT6 385 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ptchd4B9EKX1 904 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Diaph1O08808 1255 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Glud1P26443 558 aaKnown RBP13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Ly6dP35459 127 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pbx1P41778 430 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 EregQ61521 162 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cd180Q62192 661 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Slc7a6osQ7TPE5 306 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Lrrc8aQ80WG5 810 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 4933409G03RikQ8C5U0 320 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pym1Q8CHP5 203 aaKnown RBP13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Pcdha7Q91Y13 937 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Six6os1Q9CTN5 574 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Smyd3Q9CWR2 428 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 VasnQ9CZT5 673 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Rsph3bQ9DA80 389 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cmtr1Q9DBC3 837 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Atp13a1Q9EPE9 1200 aaKnown RBP13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Slc5a4aQ9ET37 656 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Irx5Q9JKQ4 484 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Tlr5Q9JLF7 859 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Gm13084A2A8N0 494 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Mmrn2A6H6E2 943 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Paxbp1P58501 919 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Cdc37Q61081 379 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Dzip3Q7TPV2 1204 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Qsox1Q8BND5 748 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Vps52Q8C754 723 aaKnown RBP13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 1700016D06RikQ9DAA5 166 aa13.31□□□□□ -0.28
Ddx55-202ENSMUST00000111438 Trpm5Q9JJH7 1158 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms