RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Gpr180Q8BPS4 441 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Klhl11Q8CE33 709 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Unc5bQ8K1S3 945 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 HibchQ8QZS1 385 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Slc18a1Q8R090 521 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Reep2Q8VCD6 254 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tex19.1Q99MV2 351 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tgm5Q9D7I9 724 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 March8Q9DBD2 286 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Gm5737A0A140LI11 423 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Patl2A2ARM1 529 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Scgb2b7D3YYY1 112 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 RpsaP14206 295 aaKnown RBP8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tph1P17532 447 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Rasgrf1P27671 1262 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 TxkP42682 527 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Yipf3Q3UDR8 347 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Agxt2Q3UEG6 513 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Cnot7Q60809 285 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Rcn2Q8BP92 320 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Cwf19l1Q8CI33 537 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ssh3Q8K330 649 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Znrd1-asQ8R0E5 213 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Atp2a1Q8R429 994 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ttc1Q91Z38 292 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tex9Q9D845 387 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tsc1Q9EP53 1161 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Gm5926E9PWJ8 236 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ift81O35594 676 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Axin2O88566 840 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Orc4O88708 433 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tspyl1O88852 379 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Mgat1P27808 447 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Wdr41Q3UDP0 460 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 HarsQ61035 509 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ssxb10Q6XAR7 170 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 TbckQ8BM85 762 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Arhgap18Q8K0Q5 663 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Nmrk1Q91W63 195 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 St13Q99L47 371 aaKnown RBP8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Stk4Q9JI11 487 aa8.97□□□□□ -0.97
Bdnf-210ENSMUST00000111051 C87977A2A958 498 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Nedd9O35177 833 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Ifnb1P01575 182 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Hcls1P49710 486 aaKnown RBP8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Cacnb3P54285 484 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Pfkfb2P70265 519 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Tmem120bQ3TA38 339 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Zbtb17Q60821 794 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 FdxrQ61578 494 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 P2ry10Q8BFU7 328 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Slc44a4Q91VA1 707 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Extl3Q9WVL6 918 aa8.96□□□□□ -0.97
Bdnf-210ENSMUST00000111051 Gm3182K7N6T8 263 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pja1O55176 578 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Aoc3O70423 765 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rb1P13405 921 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Kif5aP33175 1027 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 PorP37040 678 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Caprin2Q05A80 1031 aaKnown RBP8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pla2g4cQ64GA5 597 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Smg5Q6ZPY2 1017 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Peg10Q7TN75 958 aaKnown RBP8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rps6ka6Q7TPS0 764 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Tmc4Q7TQ65 694 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Zbed4Q80WQ9 1168 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Tlr3Q99MB1 905 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Tlr9Q9EQU3 1032 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Sertad2Q9JJG5 309 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rabgef1Q9JM13 491 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Prkab1Q9R078 270 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Aff1O88573 1216 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Zfy1P10925 782 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Ttc39dQ0VF76 604 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Trim72Q1XH17 477 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Odr4Q4PJX1 447 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 DeptorQ570Y9 409 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 E2f8Q58FA4 860 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rap1gap2Q5SVL6 712 aaKnown RBP8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Trmt2aQ8BNV1 574 aaKnown RBP8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Heatr3Q8BQM4 679 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Polr2bQ8CFI7 1174 aaKnown RBP8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Actl9Q8CG27 415 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Nudt12Q9DCN1 462 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Sgk1Q9WVC6 431 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Rasgrp1Q9Z1S3 795 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Diaph3Q9Z207 1171 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 SynrgQ5SV85 1306 aa8.96□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Heatr4E9Q357 955 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Dnajb6O54946 365 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Msh3P13705 1091 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Mex3cQ05A36 652 aaKnown RBP8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Drp2Q05AA6 957 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Gja3Q64448 417 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Sec23ipQ6NZC7 998 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Msl1Q6PDM1 616 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Ccdc134Q8C7V8 229 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Pnpt1Q8K1R3 783 aaKnown RBP8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Acat1Q8QZT1 424 aa8.95□□□□□ -0.98
Bdnf-210ENSMUST00000111051 Fkbp6Q91XW8 327 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms