RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Abcb9Q9JJ59 762 aa8.15□□□□□ -1.11
Bdnf-209ENSMUST00000111050 AfdnQ9QZQ1 1820 aaKnown RBP8.15□□□□□ -1.11
Bdnf-209ENSMUST00000111050 RptorQ8K4Q0 1335 aa8.15□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dnaaf5B9EJR8 853 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Zc3h7aE9PWW6 970 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm5862K7N5V5 267 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Mark2Q05512 776 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Aars2Q14CH7 980 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Krt31Q61765 416 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cnnm4Q69ZF7 771 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Orai3Q6P8G8 290 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 GmipQ6PGG2 971 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Trim52Q8CDV4 233 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Smap1Q91VZ6 440 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Lzts2Q91YU6 671 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Haus8Q99L00 373 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Bap1Q99PU7 728 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Hyou1Q9JKR6 999 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Arl6ip4Q9JM93 229 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cdc42ep4Q9JM96 349 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tmed2Q9R0Q3 201 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Rbm6S4R1W5 1118 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Speer3W4VSP1 261 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gbp6A0A0G2JDV3 611 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 A0A286YCQ6 122 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm43302L7N1X8 611 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 CenpaO35216 134 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Kcnh2O35219 1162 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Bnip3O55003 187 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Aff1O88573 1216 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Idh1O88844 414 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 IvlP48997 467 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Pms2P54279 859 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cnga4Q3UW12 575 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Mtus1Q5HZI1 1210 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Map2k2Q63932 401 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ttc16Q8C1F5 767 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tph2Q8CGV2 488 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Q91Z58 1206 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Pgm3Q9CYR6 542 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 DcpsQ9DAR7 338 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tjap1Q9DCD5 539 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cd274Q9EP73 290 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Scgb2b20Q9JI02 112 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Bcl9lQ67FY2 1494 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm11985A0A1B0GS61 206 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Glt1d1A4FUP9 346 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Prss40A6H6T1 365 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 A630010A05RikA9C473 232 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Nr1i3O35627 358 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 StrnO55106 780 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cdk7Q03147 346 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ankmy2Q3TPE9 440 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 BC051142Q3V0M8 400 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ampd1Q3V1D3 745 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm14685Q52KH6 695 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Zranb3Q6NZP1 1069 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Q6PD19 689 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Q80WR5 230 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Usp1Q8BJQ2 784 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dhx36Q8VHK9 1001 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dnajc9Q91WN1 259 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Wbp11Q923D5 641 aaKnown RBP8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Txndc9Q9CQ79 226 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Arl8bQ9CQW2 186 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ppp1r3gQ9CW07 347 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Mipol1Q9D9F8 279 aa8.14□□□□□ -1.11
Bdnf-209ENSMUST00000111050 MttpO08601 894 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Pgrmc1O55022 195 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Rpl5P47962 297 aaKnown RBP8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Phactr1Q2M3X8 580 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Cul4aQ3TCH7 759 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Sh3rf1Q69ZI1 892 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dhx37Q6NZL1 1150 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Hdac10Q6P3E7 666 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Zpbp2Q6X786 326 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Abtb2Q7TQI7 1024 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Olfr118Q7TRJ6 321 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 QarsQ8BML9 775 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Sfr1Q8BP27 319 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Slc35c2Q8VCX2 364 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Kremen1Q99N43 473 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tdrd12Q9CWU0 1215 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Mms19Q9D071 1031 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Col4a1P02463 1669 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Magea10A2AMW4 325 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Slc35g2D3YVE8 412 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Gm2030D3Z7C4 212 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 1700024B05RikE9Q6D7 167 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Ppef2O35385 757 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 PigrO70570 771 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Akap10O88845 662 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Tagap1P0CAX8 505 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Calm1P0DP26 149 aaKnown RBP8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Calm2P0DP27 149 aaKnown RBP8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Calm3P0DP28 149 aaKnown RBP8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Mcl1P97287 331 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Yy1Q00899 414 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Dcaf17Q3TUL7 519 aa8.13□□□□□ -1.11
Bdnf-209ENSMUST00000111050 Grik1Q60934 836 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms