RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Pcsk1nQ9QXV0 258 aa11.91□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Zc3h7bF8VPP8 982 aaKnown RBP11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 NxnP97346 435 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Lrch2Q3UMG5 773 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Ankrd45Q810N6 248 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Calhm6Q8C9E8 313 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Klhl11Q8CE33 709 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Usp27Q8CEG8 438 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Lrrc14Q8VC16 493 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Ssx2ipQ8VC66 615 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Sytl1Q99N80 567 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Rhobtb3Q9CTN4 611 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Ddah1Q9CWS0 285 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Drc3Q9D5E4 523 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Slc40a1Q9JHI9 570 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Klra17Q9JMA4 273 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Sucla2Q9Z2I9 463 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Exoc4O35382 975 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 CfhP06909 1234 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Pde6bP23440 856 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Casp2P29594 452 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Wnt10bP48614 389 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Arpp19P56212 112 aaKnown RBP11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Gja5Q01231 358 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Sult1d1Q3UZZ6 295 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Epc2Q8C0I4 808 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Krt5Q922U2 580 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Serpina9Q9D7D2 418 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Rnf6Q9DBU5 667 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Tsc1Q9EP53 1161 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Taf4bG5E8Z2 855 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 AgtP11859 477 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Gcnt1Q09324 428 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Cyp2c29Q64458 490 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Ppp2r2aQ6P1F6 447 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 TbataQ7TSD4 393 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Stkld1Q80YS9 662 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Fbxo44Q8BK26 255 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 RadxQ8C779 850 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Inpp5fQ8CDA1 1132 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Olfr805Q8VFI4 319 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Nmrk1Q91W63 195 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Cpb2Q9JHH6 422 aa11.9□□□□□ -0.5
Col20a1-201ENSMUST00000108856 Gm28043E0CXC2 719 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Ccdc175E9PVB3 822 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Krt90E9Q1Z0 538 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Men1O88559 611 aaKnown RBP11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Sema3fO88632 785 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Kcna1P16388 495 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 E2f8Q58FA4 860 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 UrgcpQ5NCI0 926 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Grm4Q68EF4 912 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 TbckQ8BM85 762 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Epha10Q8BYG9 1007 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Vwa5aQ99KC8 793 aaKnown RBP11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Gipc1Q9Z0G0 333 aa11.9□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Gm29133A0A1B0GT72 266 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Atp2c2A7L9Z8 944 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Cyth3O08967 399 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 DffaO54786 331 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 H2afxP27661 143 aaKnown RBP11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Lig1P37913 916 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 SftpbP50405 377 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 GclcP97494 637 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 SelpQ01102 768 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Nlrp4cQ3TKR3 982 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Fnbp1Q80TY0 616 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Actr5Q80US4 605 aaKnown RBP11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Fsd1lQ8BYN5 507 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Vcpip1Q8CDG3 1220 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Med15Q924H2 789 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Krt27Q9Z320 448 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Cul4bA2A432 970 aaKnown RBP11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Ppef2O35385 757 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 D630036H23RikQ3UQD6 204 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Vav2Q60992 868 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Peg10Q7TN75 958 aaKnown RBP11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Tor1aip2Q8BYU6 502 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Pdik1lQ8QZR7 341 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Olfr397Q8VEZ6 315 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Rpf2Q9JJ80 306 aaKnown RBP11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Tnfrsf10bQ9QZM4 381 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Ggps1Q9WTN0 300 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Abcb5B5X0E4 1255 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Rexo5D3YW29 759 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Cacna2d1O08532 1103 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Thumpd3P97770 505 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Lgr6Q3UVD5 967 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 C2cd5Q7TPS5 1016 aaKnown RBP11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 AmphQ7TQF7 686 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 SpidrQ8BGX7 933 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Ccdc68Q8BVC4 333 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Psip1Q99JF8 528 aaKnown RBP11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Zmynd10Q99ML0 440 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 MlklQ9D2Y4 472 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Tube1Q9D6T1 475 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Capn9Q9D805 690 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Chmp2aQ9DB34 222 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Kank3Q9Z1P7 791 aa11.89□□□□□ -0.51
Col20a1-201ENSMUST00000108856 Akap11E9Q777 1895 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms