RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Tmx4Q8C0L0 335 aa12.5□□□□□ -0.41
Trim11-202ENSMUST00000108809 Unc5bQ8K1S3 945 aa12.5□□□□□ -0.41
Trim11-202ENSMUST00000108809 Tdrd3Q91W18 743 aaKnown RBP12.5□□□□□ -0.41
Trim11-202ENSMUST00000108809 Snx24Q9CRB0 169 aa12.5□□□□□ -0.41
Trim11-202ENSMUST00000108809 Cpne8Q9DC53 577 aa12.5□□□□□ -0.41
Trim11-202ENSMUST00000108809 Tmem174Q9DCX7 243 aa12.5□□□□□ -0.41
Trim11-202ENSMUST00000108809 Tspoap1Q7TNF8 1846 aa12.5□□□□□ -0.41
Trim11-202ENSMUST00000108809 Prr7Q3V0I2 269 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Fbxo28Q8BIG4 368 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Calcoco1Q8CGU1 691 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Vps37cQ8R105 352 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Rtn3Q9ES97 964 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Extl3Q9WVL6 918 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Msh2P43247 935 aaKnown RBP12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Gtf2bP62915 316 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 AlcamQ61490 583 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Tmem117Q8BH18 514 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Gpsm2Q8VDU0 679 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Hspbp1Q99P31 357 aaKnown RBP12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Kcnh7Q9ER47 1195 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 DohhA0A1Y7VJ29 135 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Parp2O88554 559 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Hmgb2P30681 210 aaKnown RBP12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Kctd19Q562E2 927 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 P4ha1Q60715 534 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Rhbdf2Q80WQ6 827 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Efcab14Q8BGQ6 484 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Olfml3Q8BK62 406 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Iws1Q8C1D8 766 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Pls3Q99K51 630 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 PdhbQ9D051 359 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Cfap53Q9D439 514 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Rnf225Q9D7D1 332 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Rnf4Q9QZS2 194 aa12.49□□□□□ -0.41
Trim11-202ENSMUST00000108809 Irf8P23611 424 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ercc5P35689 1170 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Slc1a1P51906 523 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ccdc33Q3ULW6 985 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 R3hdm4Q4VBF2 262 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 MaeaQ4VC33 396 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Inpp4bQ6P1Y8 924 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Kcnt1Q6ZPR4 1224 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Cplx4Q80WM3 160 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Trim65Q8BFW4 522 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Lin9Q8C735 542 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Fbxo43Q8CDI2 640 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Nmrk1Q91W63 195 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ttc1Q91Z38 292 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Cd2bp2Q9CWK3 342 aaKnown RBP12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Trmt10bQ9D075 318 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Vmn2r63E9Q0K5 859 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Gm9268E9Q0M3 861 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Vmn2r62K7N712 859 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Dnajb6O54946 365 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Itgb5O70309 798 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 LxnP70202 222 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 rp9P97762 213 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Fdxacb1Q3UY23 622 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Nipa1Q8BHK1 323 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Camkk2Q8C078 588 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Cntn6Q9JMB8 1028 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Lrrc74aA0A1Y7VMD6 494 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Mmrn1B2RPV6 1210 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Xrcc6P23475 608 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Pik3caP42337 1068 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Lmntd2Q0VET5 664 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Q3UTZ3 580 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Retreg2Q6NS82 541 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Xpnpep1Q6P1B1 623 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ccdc25Q78PG9 208 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Efl1Q8C0D5 1127 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 D630039A03RikQ8K0M7 236 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Pcdha5Q91Y15 934 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Xpo6Q924Z6 1125 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ranbp17Q99NF8 1088 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Xab2Q9DCD2 855 aaKnown RBP12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Phf2Q9WTU0 1096 aa12.48□□□□□ -0.41
Trim11-202ENSMUST00000108809 Unc13dB2RUP2 1085 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Gm15448F6PZL4 682 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 GabpaQ00422 454 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Syne3Q4FZC9 975 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Cnot7Q60809 285 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Serpinb6Q60854 378 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ppp1r13bQ62415 1087 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Sh3d21Q7TSG5 549 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Gramd4Q8CB44 633 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Slc26a6Q8CIW6 758 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Dnm1lQ8K1M6 742 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Npm3Q9CPP0 175 aaKnown RBP12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Slc6a16A0A1L1SR47 742 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Gm4297D3YWB7 211 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Rasal2E9PW37 1286 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 UgcgO88693 394 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 AdssP46664 456 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ttc39dQ0VF76 604 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 4933427I04RikQ3V053 235 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Ccdc92bQ5SUE3 299 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Zcchc2Q69ZB8 1166 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 HhatQ8BMT9 499 aa12.47□□□□□ -0.41
Trim11-202ENSMUST00000108809 Gprasp2Q8BUY8 826 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms