RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Trim12aQ99PQ1 284 aa11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 S100pbpQ9D5K4 396 aa11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 Fam84aQ9D650 292 aa11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ndel1Q9ERR1 345 aa11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 ThegQ9JMB1 375 aa11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 JmyQ9QXM1 983 aa11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 Adam23Q9R1V7 829 aa11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 VarsQ9Z1Q9 1263 aaKnown RBP11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 NesQ6P5H2 1864 aaKnown RBP11.48□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tmigd3G3X8R9 209 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ccng2O08918 344 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rad51bO35719 350 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Cyp4a10O88833 509 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Actn4P57780 912 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Eef2P58252 858 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gmeb2P58929 530 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tmprss15P97435 1069 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gbp10Q000W5 611 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Lrfn1Q2WF71 766 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Pgap2Q3TQR0 254 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Zfp957Q3UT76 567 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Fdxacb1Q3UY23 622 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Slc4a10Q5DTL9 1118 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ddx4Q61496 702 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Panx2Q6IMP4 677 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Dync1li2Q6PDL0 492 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rnf220Q6PDX6 566 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Cspg5Q71M36 566 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Txndc16Q7TN22 820 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 MylipQ8BM54 445 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gnl3Q8CI11 538 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Hps3Q91VB4 1002 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gpr108Q91WD0 569 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 TcimQ9D915 106 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Adrm1Q9JKV1 407 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ehd3Q9QXY6 535 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Adgra3Q7TT36 1310 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rexo5D3YW29 759 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 E2f6O54917 272 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Mybpc3O70468 1270 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ier5O89113 308 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 PenkP22005 268 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Crabp2P22935 138 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Xrcc6P23475 608 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ighmbp2P40694 993 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Flt3Q00342 1000 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Zc3h18Q0P678 948 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Yipf3Q3UDR8 347 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Agxt2Q3UEG6 513 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gm29609Q3UU56 907 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ppp1r13bQ62415 1087 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Crtc1Q68ED7 630 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Luc7l2Q7TNC4 392 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gtf3c2Q8BL74 907 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Rsad2Q8CBB9 362 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Cog3Q8CI04 820 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Golph3lQ8R088 285 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Aldh1l1Q8R0Y6 902 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Klhl25Q8R2P1 589 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Slf1Q8R3P9 1054 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Tor1aip1Q921T2 595 aaKnown RBP11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ankrd1Q9CR42 319 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Acot3Q9QYR7 432 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Uchl5Q9WUP7 329 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Gbp2Q9Z0E6 589 aa11.47□□□□□ -0.57
Trim61-201ENSMUST00000078409 Atp8b3Q6UQ17 1335 aa11.46□□□□□ -0.57
Trim61-201ENSMUST00000078409 Ttc13A0A1L1SSC7 844 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Prrt4B2RU40 902 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Tpm3-rs7D3Z2H9 248 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Gm3636E9Q5P1 227 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Nccrp1G3X9C2 266 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Gm3755K7N743 167 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Gm3033M0QWI0 180 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Gm3532M0QWL4 194 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Rgs2O08849 211 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Igf2bp1O88477 577 aaKnown RBP11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Slc4a1P04919 929 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Nedd1P33215 660 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Mybl1P51960 751 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Cct7P80313 544 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Col6a1Q04857 1025 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Zfp560Q3URI6 754 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 P3h1Q3V1T4 739 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Orc2Q60862 576 aaKnown RBP11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Krt40Q6IFX3 439 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Krt9Q6RHW0 743 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Cep55Q8BT07 462 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 SynpoQ8CC35 929 aaKnown RBP11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Tbc1d23Q8K0F1 684 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Saysd1Q8K190 188 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Agr3Q8R3W7 165 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Scrn2Q8VCA8 425 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Fam192aQ91WE2 254 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Prpf6Q91YR7 941 aaKnown RBP11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Ivns1abpQ920Q8 642 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Smc6Q924W5 1097 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Vta1Q9CR26 309 aa11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 MrrfQ9D6S7 262 aaKnown RBP11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 Noa1Q9JJG9 693 aaKnown RBP11.46□□□□□ -0.58
Trim61-201ENSMUST00000078409 TnksQ6PFX9 1320 aa11.46□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms