RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ube2q2Q8K2Z8 378 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Cse1lQ9ERK4 971 aaKnown RBP10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Dbn1Q9QXS6 706 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Klra10Q9R1G6 266 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mtmr7Q9Z2C9 660 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Cst8P32766 142 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ccdc138Q0VF22 680 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Cyfip2Q5SQX6 1253 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Akap4Q60662 849 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Khdrbs1Q60749 443 aaKnown RBP10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Meis1Q60954 390 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 4933409G03RikQ8C5U0 320 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ddx24Q9ESV0 857 aaKnown RBP10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mrpl40Q9Z2Q5 206 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ltbp4Q8K4G1 1666 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Akap5D3YVF0 745 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Hnrnph1O35737 449 aaKnown RBP10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 PorP37040 678 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 NxnP97346 435 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tmem59lQ7TNI2 337 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Drap1Q9D6N5 205 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Dgcr8Q9EQM6 773 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ndufa13Q9ERS2 144 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rtl9Q32KG4 1339 aa10.58□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Flvcr1B2RXV4 560 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Xbp1O35426 267 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mettl17Q3U2U7 461 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ubn1Q4G0F8 1135 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Itih1Q61702 907 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ankrd45Q810N6 248 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ppfia2Q8BSS9 1257 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Thsd7aQ69ZU6 1645 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 1700017N19RikA0A087WPJ1 469 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 VdrP48281 422 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 StamP70297 548 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 RenbpP82343 430 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Llgl2Q3TJ91 1027 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Adamts18Q4VC17 1219 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Krt31Q61765 416 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Skiv2lQ6NZR5 1244 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Hdac10Q6P3E7 666 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Usp38Q8BW70 1042 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fam53cQ8BXQ8 393 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 PreplQ8C167 725 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Adgra1Q8C4G9 578 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Krtap5-3Q9D226 196 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Capn9Q9D805 690 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 IydQ9DCX8 285 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Scn7aB1AYL1 1681 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm29133A0A1B0GT72 266 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 A630010A05RikA9C473 232 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Aknad1E9Q8N6 675 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Zc3h7bF8VPP8 982 aaKnown RBP10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 MyocO70624 490 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 GsnP13020 780 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ptk2P34152 1090 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gja5Q01231 358 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ddx3xQ62167 662 aaKnown RBP10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Grm4Q68EF4 912 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sez6lQ6P1D5 963 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ipo5Q8BKC5 1097 aaKnown RBP10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Calhm6Q8C9E8 313 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Eif2b5Q8CHW4 717 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Kiaa0391Q8JZY4 584 aaKnown RBP10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 CacybpQ9CXW3 229 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Wdr64Q9D565 1086 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tgm5Q9D7I9 724 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 LrmdaQ9D9B4 229 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Heg1E9Q7X6 1337 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rabgap1A2AWA9 1064 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Timm44O35857 452 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 PltpP55065 493 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Epha2Q03145 977 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Carmil2Q3V3V9 1296 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 PhkbQ7TSH2 1085 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Acat1Q8QZT1 424 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Slc5a5Q99PN0 618 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Scrn1Q9CZC8 414 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mis18aQ9CZJ6 204 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Borcs6Q9D6W8 360 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tmx2Q9D710 295 aaKnown RBP10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tlr2Q9QUN7 784 aa10.57□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tcp11x2A2AEI7 503 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm8994E9PV04 411 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Znf827Q505G8 1078 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Abhd15Q5F2F2 459 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gpt2Q8BGT5 522 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Zhx2Q8C0C0 836 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 YarsQ91WQ3 528 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tlr3Q99MB1 905 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tdrd1Q99MV1 1172 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Wars2Q9CYK1 360 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tekt1Q9DAJ2 418 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Dkc1Q9ESX5 509 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ifi202Q9R002 445 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm5926E9PWJ8 236 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fgd3O88842 733 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gucy2eP52785 1108 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Hspa8P63017 646 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rufy4Q3TYX8 563 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms