RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 GmncQ3URY2 333 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Krt72Q6IME9 520 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ankrd13aQ80UP5 588 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 BfarQ8R079 450 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stard7Q8R1R3 373 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pcdhb15Q91Y04 786 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rgs10Q9CQE5 181 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pgm1Q9D0F9 562 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PudpQ9D5U5 234 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Peg12Q9WVA7 283 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 SufuQ9Z0P7 484 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Apba1B2RUJ5 842 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stag2O35638 1231 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Klc1O88447 541 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Xlr3aQ60595 226 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc13a5Q67BT3 572 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Krr1Q8BGA5 380 aaKnown RBP9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Q8BP99 230 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mageb18Q8BQR7 327 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Q8C5C9 218 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gpc5Q8CAL5 572 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gimap4Q99JY3 219 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Lrrc46Q9DAP0 323 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc40a1Q9JHI9 570 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kcnq5Q9JK45 933 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Krt17Q9QWL7 433 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Akap17bA2A3V1 959 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 TprnA2AI08 749 aaKnown RBP9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Brpf3B2KF05 1204 aaKnown RBP9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zfp651E9PZ11 729 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm4312K9J7E2 289 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Casp12O08736 419 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pou5f1P20263 352 aaKnown RBP9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Fam92bQ3V2J0 292 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ano4Q8C5H1 955 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Arl8aQ8VEH3 186 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Eaf2Q91ZD6 262 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tlr2Q9QUN7 784 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 A530032D15RikE9Q422 215 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc27a6E9Q9W4 619 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nrg3O35181 713 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 AgtP11859 477 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Psmc1P62192 440 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 NpeppsQ11011 920 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Fam193bQ3U2K0 892 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tfcp2l1Q3UNW5 479 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Lrrc8eQ66JT1 795 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Clca2Q8BG22 942 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sept10Q8C650 452 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Art3Q8R2G4 371 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Trpm8Q8R4D5 1104 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Msi2Q920Q6 346 aaKnown RBP9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Q922C1 641 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pard3bQ9CSB4 1203 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Drap1Q9D6N5 205 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Timm50Q9D880 353 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Jph2Q9ET78 696 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Atp11cQ9QZW0 1129 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slfn1Q9Z0I7 337 aa9.69□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Osbpl9A2A8Z1 736 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Serpina3kP07759 418 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tmc5Q32NZ6 967 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stip1Q60864 543 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Hif1aQ61221 836 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rbm15bQ6PHZ5 887 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Phf21aQ6ZPK0 659 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Phactr3Q8BYK5 558 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Alx1Q8C8B0 326 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Eif2b5Q8CHW4 717 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 McamQ8R2Y2 648 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Anapc4Q91W96 807 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ten1Q9D7K2 161 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 CrotQ9DC50 612 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kank3Q9Z1P7 791 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Chek2Q9Z265 546 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Serpinb6cW4VSP4 379 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 CoblQ5NBX1 1337 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm13084A2A8N0 494 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Vmn2r121A2BE32 847 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Hcn2O88703 863 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PtpreP49446 699 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nfe2Q07279 373 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nfe2l2Q60795 597 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccna1Q61456 421 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 TwistnbQ78WZ7 330 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Fam185aQ7TPD2 378 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Uba6Q8C7R4 1053 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Amhr2Q8K592 568 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gid8Q9D7M1 228 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Dnajc7Q9QYI3 494 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Map3k15A2AQW0 1331 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 4930469K13RikA0A286YDB2 92 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm7168A0AUV4 508 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm8994E9PV04 411 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm5861F6VCN9 180 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 4933402N22RikF7D1B3 190 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 DtnbO70585 659 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Irak1Q62406 710 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Q8CEZ4 452 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Plekha4Q8VC98 588 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms