RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Prpf4Q9DAW6 521 aaKnown RBP10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Sucla2Q9Z2I9 463 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Gm5926E9PWJ8 236 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Eddm13E9Q7F5 164 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Gm6583E9Q8Z1 469 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Gm3182K7N6T8 263 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Hspa9P38647 679 aaKnown RBP10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ppp1r12cQ3UMT1 782 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Odr4Q4PJX1 447 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Epha7Q61772 998 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Trim37Q6PCX9 961 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Nemp2Q8CB65 421 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Iqcf1Q9D9K8 182 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rnf103Q9R1W3 683 aa10.14□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Cyp4f40G3UW81 524 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Mdm4O35618 489 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 P01734 135 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rasgrf1P27671 1262 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Frmd8Q3UFK8 466 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Cyfip1Q7TMB8 1253 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 SpidrQ8BGX7 933 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rcn2Q8BP92 320 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Slf1Q8R3P9 1054 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Msantd4Q91YU3 345 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Med15Q924H2 789 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Sertad2Q9JJG5 309 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Scgb2b12S4R2L0 112 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Dynlt1P51807 113 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Fbln1Q08879 705 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Gdpd4Q3TT99 632 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 R3hdm2Q80TM6 1044 aaKnown RBP10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 AdigQ8R400 80 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Lrrc8cQ8R502 803 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Usp33Q8R5K2 909 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Slc12a8Q8VI23 705 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Spdl1Q923A2 608 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Trap1Q9CQN1 706 aaKnown RBP10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Krt20Q9D312 431 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rnf4Q9QZS2 194 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 SmapQ9R0P4 181 aaKnown RBP10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Scgb2b7D3YYY1 112 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ifnb1P01575 182 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rbm46P86049 533 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Cnga4Q3UW12 575 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Kiaa0319Q5SZV5 1081 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Tbc1d10cQ8C9V1 444 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 CactinQ9CS00 772 aaKnown RBP10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 RpainQ9CWY9 219 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Mxra8Q9DBV4 442 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Nudt12Q9DCN1 462 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ddx24Q9ESV0 857 aaKnown RBP10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Tfr2Q9JKX3 798 aa10.13□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Myo1eE9Q634 1107 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Adam7O35227 789 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Nedd1P33215 660 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 S100bP50114 92 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Dab2ipQ3UHC7 1189 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Oca2Q62052 833 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Sec23ipQ6NZC7 998 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Kat5Q8CHK4 513 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 OplahQ8K010 1288 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Rnf6Q9DBU5 667 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Edf1Q9JMG1 148 aaKnown RBP10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Slc6a16A0A1L1SR47 742 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Msh3P13705 1091 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Sesn2P58043 480 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Lrch1P62046 709 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Sema3eP70275 775 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Klhdc9Q3USL1 350 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 IgflQ6B9Z0 140 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Kcnt1Q6ZPR4 1224 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Wnk4Q80UE6 1222 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Zfp446Q8C9M8 523 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Bcas3Q8CCN5 928 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Btbd6Q8K2J9 488 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ccdc137Q8R0K4 290 aaKnown RBP10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Bbs5Q9CZQ9 341 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Extl2Q9ES89 330 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Pcsk1nQ9QXV0 258 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Gm28360A0A087WR25 190 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Ift81O35594 676 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Atp2a2O55143 1044 aaKnown RBP10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 VdrP48281 422 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Wfs1P56695 890 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Meis2P97367 477 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Spout1Q3UHX9 385 aaKnown RBP10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Nyap1Q6PFX7 833 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Q8BGD0 127 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 MgarpQ8VI64 283 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 TarsQ9D0R2 722 aaKnown RBP10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 IscuQ9D7P6 168 aa10.12□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Zfp266E9Q2S7 604 aa10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Syt2P46097 422 aa10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 E2f5Q61502 335 aa10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Spata24Q6P926 205 aa10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 SrlQ7TQ48 910 aa10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Pkn2Q8BWW9 983 aa10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Anapc4Q91W96 807 aa10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 YwhabQ9CQV8 246 aaKnown RBP10.11□□□□□ -0.79
Col6a1-201ENSMUST00000001147 Extl3Q9WVL6 918 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms