RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C CNA1P23287 553 aa7.27□□□□□ -1.25
PUP1YOR157C RPC19P28000 142 aaKnown RBP7.27□□□□□ -1.25
PUP1YOR157C PRE2P30656 287 aaKnown RBP7.27□□□□□ -1.25
PUP1YOR157C SNC1P31109 117 aa7.27□□□□□ -1.25
PUP1YOR157C ARP2P32381 391 aaKnown RBP7.27□□□□□ -1.25
PUP1YOR157C GLC7P32598 312 aaKnown RBP7.27□□□□□ -1.25
PUP1YOR157C QDR1P40475 563 aa7.27□□□□□ -1.25
PUP1YOR157C NUP57P48837 541 aa7.27□□□□□ -1.25
PUP1YOR157C YIP5P53108 310 aa7.27□□□□□ -1.25
PUP1YOR157C MPC1P53157 130 aaKnown RBP7.27□□□□□ -1.25
PUP1YOR157C SMM1P53720 384 aaKnown RBP7.27□□□□□ -1.25
PUP1YOR157C ATG38Q05789 226 aaKnown RBP7.27□□□□□ -1.25
PUP1YOR157C VPS36Q06696 566 aa7.27□□□□□ -1.25
PUP1YOR157C YCR100CP25606 316 aa7.26□□□□□ -1.25
PUP1YOR157C PPA2P28239 310 aa7.26□□□□□ -1.25
PUP1YOR157C JEN1P36035 616 aa7.26□□□□□ -1.25
PUP1YOR157C BUR6P40096 142 aa7.26□□□□□ -1.25
PUP1YOR157C YGR201CP42936 225 aa7.26□□□□□ -1.25
PUP1YOR157C YJR098CP47139 656 aa7.26□□□□□ -1.25
PUP1YOR157C IPK1Q06667 281 aa7.26□□□□□ -1.25
PUP1YOR157C THI72Q08579 599 aa7.26□□□□□ -1.25
PUP1YOR157C YLR108CQ12259 485 aa7.26□□□□□ -1.25
PUP1YOR157C NCA2Q12374 616 aa7.26□□□□□ -1.25
PUP1YOR157C YGR035W-AQ45U48 73 aa7.26□□□□□ -1.25
PUP1YOR157C YOL087CQ99247 1116 aa7.26□□□□□ -1.25
PUP1YOR157C YER190C-BP0CX94 160 aa7.25□□□□□ -1.25
PUP1YOR157C YEL077W-AP0CX95 160 aa7.25□□□□□ -1.25
PUP1YOR157C YGR296C-BP0CX96 160 aa7.25□□□□□ -1.25
PUP1YOR157C YPL283W-BP0CX97 160 aa7.25□□□□□ -1.25
PUP1YOR157C YPR204C-AP0CX98 160 aa7.25□□□□□ -1.25
PUP1YOR157C YFL068WP0CX99 160 aa7.25□□□□□ -1.25
PUP1YOR157C YLL066W-AP0CY00 160 aa7.25□□□□□ -1.25
PUP1YOR157C YLL067W-AP0CY01 160 aa7.25□□□□□ -1.25
PUP1YOR157C APA2P22108 325 aa7.25□□□□□ -1.25
PUP1YOR157C YNK1P36010 153 aaKnown RBP7.25□□□□□ -1.25
PUP1YOR157C RPP1P38786 293 aa7.25□□□□□ -1.25
PUP1YOR157C PEX18P38855 283 aa7.25□□□□□ -1.25
PUP1YOR157C YIL166CP40445 542 aa7.25□□□□□ -1.25
PUP1YOR157C SNM1P40993 198 aa7.25□□□□□ -1.25
PUP1YOR157C GCN20P43535 752 aaKnown RBP7.25□□□□□ -1.25
PUP1YOR157C PET191Q02772 108 aa7.25□□□□□ -1.25
PUP1YOR157C RAD33Q04231 177 aa7.25□□□□□ -1.25
PUP1YOR157C MCT1Q12283 360 aa7.25□□□□□ -1.25
PUP1YOR157C ERP4Q12450 207 aa7.25□□□□□ -1.25
PUP1YOR157C RAX2Q12465 1220 aa7.25□□□□□ -1.25
PUP1YOR157C RPL6BP05739 176 aaKnown RBP7.24□□□□□ -1.25
PUP1YOR157C EXO70P19658 623 aa7.24□□□□□ -1.25
PUP1YOR157C HBS1P32769 611 aaKnown RBP7.24□□□□□ -1.25
PUP1YOR157C MSN4P33749 630 aa7.24□□□□□ -1.25
PUP1YOR157C MTW1P39731 289 aa7.24□□□□□ -1.25
PUP1YOR157C GDI1P39958 451 aaKnown RBP7.24□□□□□ -1.25
PUP1YOR157C BNA2P47125 453 aa7.24□□□□□ -1.25
PUP1YOR157C MEP3P53390 489 aa7.24□□□□□ -1.25
PUP1YOR157C TPS1Q00764 495 aaKnown RBP7.24□□□□□ -1.25
PUP1YOR157C LGE1Q02796 332 aaKnown RBP7.24□□□□□ -1.25
PUP1YOR157C YDR387CQ04162 555 aa7.24□□□□□ -1.25
PUP1YOR157C YPR127WQ06494 345 aa7.24□□□□□ -1.25
PUP1YOR157C YPR097WQ06839 1073 aa7.24□□□□□ -1.25
PUP1YOR157C SKI7Q08491 747 aaPredicted RBP7.24□□□□□ -1.25
PUP1YOR157C DIA2Q08496 732 aaPredicted RBP7.24□□□□□ -1.25
PUP1YOR157C TIM9O74700 87 aa7.23□□□□□ -1.25
PUP1YOR157C YML003WP0CF16 290 aa7.23□□□□□ -1.25
PUP1YOR157C YCR051WP25631 222 aa7.23□□□□□ -1.25
PUP1YOR157C PUP2P32379 260 aa7.23□□□□□ -1.25
PUP1YOR157C ARC19P33204 171 aaKnown RBP7.23□□□□□ -1.25
PUP1YOR157C YBR063CP38083 404 aa7.23□□□□□ -1.25
PUP1YOR157C RBG1P39729 369 aa7.23□□□□□ -1.25
PUP1YOR157C FLX1P40464 311 aa7.23□□□□□ -1.25
PUP1YOR157C SGN1P40561 250 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
PUP1YOR157C YNR064CP53750 290 aa7.23□□□□□ -1.25
PUP1YOR157C YKR011CQ02209 353 aa7.23□□□□□ -1.25
PUP1YOR157C ARO10Q06408 635 aa7.23□□□□□ -1.25
PUP1YOR157C MFG1Q07684 458 aa7.23□□□□□ -1.25
PUP1YOR157C SRL1Q08673 210 aa7.23□□□□□ -1.25
PUP1YOR157C RAS1P01119 309 aa7.22□□□□□ -1.25
PUP1YOR157C PCL1P24867 279 aa7.22□□□□□ -1.25
PUP1YOR157C RHB1P25378 209 aa7.22□□□□□ -1.25
PUP1YOR157C POL4P25615 582 aa7.22□□□□□ -1.25
PUP1YOR157C DEP1P31385 405 aa7.22□□□□□ -1.25
PUP1YOR157C TIF3P34167 436 aaKnown RBP7.22□□□□□ -1.25
PUP1YOR157C YKL071WP36086 256 aa7.22□□□□□ -1.25
PUP1YOR157C PRY2P36110 329 aa7.22□□□□□ -1.25
PUP1YOR157C APL3P38065 1025 aa7.22□□□□□ -1.25
PUP1YOR157C SWD1P39706 426 aa7.22□□□□□ -1.25
PUP1YOR157C IMA5P40884 581 aa7.22□□□□□ -1.25
PUP1YOR157C YJL055WP47044 245 aa7.22□□□□□ -1.25
PUP1YOR157C YGL235WP53071 178 aa7.22□□□□□ -1.25
PUP1YOR157C YPL108WQ02872 168 aaPredicted RBP7.22□□□□□ -1.25
PUP1YOR157C PRP11Q07350 266 aaPredicted RBP7.22□□□□□ -1.25
PUP1YOR157C MIM1Q08176 113 aa7.22□□□□□ -1.25
PUP1YOR157C USB1Q12208 290 aaKnown RBP7.22□□□□□ -1.25
PUP1YOR157C PDE2P06776 526 aa7.21□□□□□ -1.26
PUP1YOR157C YOL163WP0CF20 169 aa7.21□□□□□ -1.26
PUP1YOR157C VPH2P32341 215 aa7.21□□□□□ -1.26
PUP1YOR157C PAD1P33751 242 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
PUP1YOR157C ECM15P35195 104 aa7.21□□□□□ -1.26
PUP1YOR157C YHR035WP38769 630 aa7.21□□□□□ -1.26
PUP1YOR157C YEL068CP39977 110 aa7.21□□□□□ -1.26
PUP1YOR157C TAX4P47030 604 aa7.21□□□□□ -1.26
PUP1YOR157C ASI3P53983 676 aa7.21□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms