RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YGL101WP53144 215 aa9.02□□□□□ -0.97
UBA4YHR111W DAM1P53267 343 aa9.02□□□□□ -0.97
UBA4YHR111W POL4P25615 582 aa9.01□□□□□ -0.97
UBA4YHR111W PAD1P33751 242 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
UBA4YHR111W MRPL16P38064 232 aa9.01□□□□□ -0.97
UBA4YHR111W YGP1P38616 354 aaKnown RBP9.01□□□□□ -0.97
UBA4YHR111W NAS2P40555 220 aa9.01□□□□□ -0.97
UBA4YHR111W POP1P41812 875 aa9.01□□□□□ -0.97
UBA4YHR111W IDP2P41939 412 aa9.01□□□□□ -0.97
UBA4YHR111W MRPL19P53875 158 aa9.01□□□□□ -0.97
UBA4YHR111W RSA3Q05942 220 aaKnown RBP9.01□□□□□ -0.97
UBA4YHR111W UIP4Q08926 304 aa9.01□□□□□ -0.97
UBA4YHR111W RIB3Q99258 208 aa9.01□□□□□ -0.97
UBA4YHR111W GAS1P22146 559 aaKnown RBP9□□□□□ -0.97
UBA4YHR111W YCL042WP25572 119 aa9□□□□□ -0.97
UBA4YHR111W MDH3P32419 343 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
UBA4YHR111W RTC2P38279 296 aa9□□□□□ -0.97
UBA4YHR111W RPS20P38701 121 aaKnown RBP9□□□□□ -0.97
UBA4YHR111W YHL037CP38733 133 aa9□□□□□ -0.97
UBA4YHR111W SBE22P38814 852 aa9□□□□□ -0.97
UBA4YHR111W ZRG8P40021 1076 aa9□□□□□ -0.97
UBA4YHR111W YMR144WP40214 342 aaKnown RBP9□□□□□ -0.97
UBA4YHR111W STB1P42845 420 aa9□□□□□ -0.97
UBA4YHR111W PCP1P53259 346 aa9□□□□□ -0.97
UBA4YHR111W ELA1P53861 379 aaPredicted RBP9□□□□□ -0.97
UBA4YHR111W MRP51Q02950 344 aa9□□□□□ -0.97
UBA4YHR111W API2Q04413 109 aa9□□□□□ -0.97
UBA4YHR111W HMS1Q12398 434 aa9□□□□□ -0.97
UBA4YHR111W YHR214C-EQ8TGK0 99 aa9□□□□□ -0.97
UBA4YHR111W SEC12P11655 471 aa8.99□□□□□ -0.97
UBA4YHR111W MTR2P34232 184 aaKnown RBP8.99□□□□□ -0.97
UBA4YHR111W AHP1P38013 176 aaKnown RBP8.99□□□□□ -0.97
UBA4YHR111W RSM24Q03976 319 aa8.99□□□□□ -0.97
UBA4YHR111W LOT6Q07923 191 aa8.99□□□□□ -0.97
UBA4YHR111W MED2Q12124 431 aa8.99□□□□□ -0.97
UBA4YHR111W PRB1P09232 635 aa8.98□□□□□ -0.97
UBA4YHR111W CAM1P29547 415 aaKnown RBP8.98□□□□□ -0.97
UBA4YHR111W PEP12P32854 288 aa8.98□□□□□ -0.97
UBA4YHR111W SLM4P38247 162 aa8.98□□□□□ -0.97
UBA4YHR111W SNL1P40548 159 aa8.98□□□□□ -0.97
UBA4YHR111W MDJ2P42834 146 aa8.98□□□□□ -0.97
UBA4YHR111W YFL051CP43552 160 aa8.98□□□□□ -0.97
UBA4YHR111W EXG2P52911 562 aa8.98□□□□□ -0.97
UBA4YHR111W AGE1Q04412 482 aa8.98□□□□□ -0.97
UBA4YHR111W MRL1Q06815 381 aa8.98□□□□□ -0.97
UBA4YHR111W ATR1P13090 542 aa8.97□□□□□ -0.97
UBA4YHR111W RPC82P32349 654 aa8.97□□□□□ -0.97
UBA4YHR111W ISC1P40015 477 aaKnown RBP8.97□□□□□ -0.97
UBA4YHR111W AVT7P40501 490 aa8.97□□□□□ -0.97
UBA4YHR111W QRI7P43122 407 aa8.97□□□□□ -0.97
UBA4YHR111W ILM1P47155 203 aa8.97□□□□□ -0.97
UBA4YHR111W YDR102CQ03864 110 aa8.97□□□□□ -0.97
UBA4YHR111W YAP6Q03935 383 aa8.97□□□□□ -0.97
UBA4YHR111W RVB1Q03940 463 aaKnown RBP8.97□□□□□ -0.97
UBA4YHR111W ELP6Q04868 273 aa8.97□□□□□ -0.97
UBA4YHR111W CTS2Q06350 511 aa8.97□□□□□ -0.97
UBA4YHR111W RTC5Q12108 567 aaKnown RBP8.97□□□□□ -0.97
UBA4YHR111W SPO7P18410 259 aa8.96□□□□□ -0.98
UBA4YHR111W EXG1P23776 448 aaKnown RBP8.96□□□□□ -0.98
UBA4YHR111W GIT1P25346 518 aa8.96□□□□□ -0.98
UBA4YHR111W PPA2P28239 310 aa8.96□□□□□ -0.98
UBA4YHR111W PPG1P32838 368 aa8.96□□□□□ -0.98
UBA4YHR111W MLH1P38920 769 aa8.96□□□□□ -0.98
UBA4YHR111W RRG9P40156 214 aa8.96□□□□□ -0.98
UBA4YHR111W YIL165CP40446 119 aa8.96□□□□□ -0.98
UBA4YHR111W MPH1P40562 993 aa8.96□□□□□ -0.98
UBA4YHR111W SAM37P50110 327 aa8.96□□□□□ -0.98
UBA4YHR111W ACS2P52910 683 aaKnown RBP8.96□□□□□ -0.98
UBA4YHR111W RRN9P53437 365 aa8.96□□□□□ -0.98
UBA4YHR111W MIM1Q08176 113 aa8.96□□□□□ -0.98
UBA4YHR111W ARN2P38724 620 aa8.95□□□□□ -0.98
UBA4YHR111W CHL4P38907 458 aa8.95□□□□□ -0.98
UBA4YHR111W YER184CP39961 794 aa8.95□□□□□ -0.98
UBA4YHR111W YRB2P40517 327 aa8.95□□□□□ -0.98
UBA4YHR111W MOB2P43563 287 aa8.95□□□□□ -0.98
UBA4YHR111W DPB11P47027 764 aaPredicted RBP8.95□□□□□ -0.98
UBA4YHR111W APM1Q00776 475 aaPredicted RBP8.95□□□□□ -0.98
UBA4YHR111W NUP116Q02630 1113 aa8.95□□□□□ -0.98
UBA4YHR111W HAS1Q03532 505 aaKnown RBP8.95□□□□□ -0.98
UBA4YHR111W SSY1Q03770 852 aa8.95□□□□□ -0.98
UBA4YHR111W SMP3Q04174 516 aa8.95□□□□□ -0.98
UBA4YHR111W NCE102Q12207 173 aaRIP-Chip data8.95□□□□□ -0.98not detected
UBA4YHR111W TPK3P05986 398 aa8.94□□□□□ -0.98
UBA4YHR111W MIA40P36046 403 aa8.94□□□□□ -0.98
UBA4YHR111W ACS1Q01574 713 aa8.94□□□□□ -0.98
UBA4YHR111W RCE1Q03530 315 aa8.94□□□□□ -0.98
UBA4YHR111W OST6Q03723 332 aa8.94□□□□□ -0.98
UBA4YHR111W BNA7Q04066 261 aa8.94□□□□□ -0.98
UBA4YHR111W SIA1Q12212 622 aa8.94□□□□□ -0.98
UBA4YHR111W RPS16AP0CX51 143 aaKnown RBP8.93□□□□□ -0.98
UBA4YHR111W RPS16BP0CX52 143 aaKnown RBP8.93□□□□□ -0.98
UBA4YHR111W URE2P23202 354 aaKnown RBP8.93□□□□□ -0.98
UBA4YHR111W ITR1P30605 584 aa8.93□□□□□ -0.98
UBA4YHR111W VPH2P32341 215 aa8.93□□□□□ -0.98
UBA4YHR111W ECM8P38246 354 aa8.93□□□□□ -0.98
UBA4YHR111W YBR138CP38277 524 aa8.93□□□□□ -0.98
UBA4YHR111W PRS3P38689 320 aaKnown RBP8.93□□□□□ -0.98
UBA4YHR111W SSY5P47002 699 aa8.93□□□□□ -0.98
UBA4YHR111W COG5P53951 403 aa8.93□□□□□ -0.98
UBA4YHR111W RPL6AQ02326 176 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms