RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	DSK2	P48510	373 aa		0.9	□□□□□ -2.27
CSN9	YDR179C	TPC1	P53257	314 aa		0.9	□□□□□ -2.27
CSN9	YDR179C	MRX9	Q07349	420 aa	Known RBP	0.9	□□□□□ -2.27
CSN9	YDR179C	RPS16A	P0CX51	143 aa	Known RBP	0.89	□□□□□ -2.27
CSN9	YDR179C	RPS16B	P0CX52	143 aa	Known RBP	0.89	□□□□□ -2.27
CSN9	YDR179C	CKI1	P20485	582 aa		0.89	□□□□□ -2.27
CSN9	YDR179C	PUP2	P32379	260 aa		0.89	□□□□□ -2.27
CSN9	YDR179C	BUD2	P33314	1104 aa		0.89	□□□□□ -2.27
CSN9	YDR179C	AIM29	P36154	155 aa		0.89	□□□□□ -2.27
CSN9	YDR179C	MLC1	P53141	149 aa		0.89	□□□□□ -2.27
CSN9	YDR179C	GYL1	Q04322	720 aa		0.89	□□□□□ -2.27
CSN9	YDR179C	HSP82	P02829	709 aa	Known RBP	0.88	□□□□□ -2.27
CSN9	YDR179C	RPL6B	P05739	176 aa	Known RBP	0.88	□□□□□ -2.27
CSN9	YDR179C	RPL26A	P05743	127 aa	Known RBP	0.88	□□□□□ -2.27
CSN9	YDR179C	SCO1	P23833	295 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	DCC1	P25559	380 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	HMX1	P32339	317 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	YJR141W	P47172	347 aa	Predicted RBP	0.88	□□□□□ -2.27
CSN9	YDR179C	RPL26B	P53221	127 aa	Known RBP	0.88	□□□□□ -2.27
CSN9	YDR179C	RPL6A	Q02326	176 aa	Known RBP	0.88	□□□□□ -2.27
CSN9	YDR179C	NAT4	Q04751	285 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	ARC18	Q05933	178 aa	Known RBP	0.88	□□□□□ -2.27
CSN9	YDR179C	VPS68	Q12016	184 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	VIK1	Q12045	647 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	GLE1	Q12315	538 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	YOR012W	Q12351	137 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	SMC6	Q12749	1114 aa		0.88	□□□□□ -2.27
CSN9	YDR179C	ZWF1	P11412	505 aa	Known RBP	0.87	□□□□□ -2.27
CSN9	YDR179C	THR4	P16120	514 aa	Known RBP	0.87	□□□□□ -2.27
CSN9	YDR179C	PRE7	P23724	241 aa	Known RBP	0.87	□□□□□ -2.27
CSN9	YDR179C	MMS21	P38632	267 aa		0.87	□□□□□ -2.27
CSN9	YDR179C	YMR134W	P40207	237 aa		0.87	□□□□□ -2.27
CSN9	YDR179C	YJL055W	P47044	245 aa		0.87	□□□□□ -2.27
CSN9	YDR179C	YML6	P51998	286 aa		0.87	□□□□□ -2.27
CSN9	YDR179C	MIG2	P53035	382 aa		0.87	□□□□□ -2.27
CSN9	YDR179C	SXM1	Q04175	944 aa	Known RBP	0.87	□□□□□ -2.27
CSN9	YDR179C	SPO77	Q06134	477 aa		0.87	□□□□□ -2.27
CSN9	YDR179C	RTC5	Q12108	567 aa	Known RBP	0.87	□□□□□ -2.27
CSN9	YDR179C	AIM45	Q12480	344 aa	Known RBP	0.87	□□□□□ -2.27
CSN9	YDR179C	REP1	P03871	373 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	MAS1	P10507	462 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	MXR2	P25566	168 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	SUR1	P33300	382 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	PEX32	P38292	413 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	YFR054C	P43622	192 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	FYV8	P46949	817 aa	Known RBP	0.86	□□□□□ -2.27
CSN9	YDR179C	YHC3	P47040	408 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	LIF1	P53150	421 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	YNR066C	P53752	436 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	MYO5	Q04439	1219 aa	Known RBP	0.86	□□□□□ -2.27
CSN9	YDR179C	YMR310C	Q04867	317 aa	Predicted RBP	0.86	□□□□□ -2.27
CSN9	YDR179C	MIM1	Q08176	113 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	PRR2	Q12310	699 aa		0.86	□□□□□ -2.27
CSN9	YDR179C	HIS3	P06633	220 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	TFS1	P14306	219 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	CDC42	P19073	191 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	UTR1	P21373	530 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	RBK1	P25332	333 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	MEI5	P32489	222 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	MRPL6	P32904	214 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	DAN1	P47178	298 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	SSU72	P53538	206 aa	Predicted RBP	0.85	□□□□□ -2.27
CSN9	YDR179C	BIO4	P53630	237 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	RDL2	Q08742	149 aa	Known RBP	0.85	□□□□□ -2.27
CSN9	YDR179C	SFG1	Q12507	346 aa		0.85	□□□□□ -2.27
CSN9	YDR179C	RAD1	P06777	1100 aa		0.84	□□□□□ -2.27
CSN9	YDR179C	GCG1	P32656	232 aa	Known RBP	0.84	□□□□□ -2.27
CSN9	YDR179C	IML3	P38265	245 aa		0.84	□□□□□ -2.27
CSN9	YDR179C	YHR045W	P38775	560 aa		0.84	□□□□□ -2.27
CSN9	YDR179C	YHR122W	P38829	231 aa		0.84	□□□□□ -2.27
CSN9	YDR179C	EFM4	P40516	257 aa		0.84	□□□□□ -2.27
CSN9	YDR179C	ALG9	P53868	555 aa	Known RBP	0.84	□□□□□ -2.27
CSN9	YDR179C	YMR166C	Q03829	368 aa		0.84	□□□□□ -2.27
CSN9	YDR179C	SUE1	Q06524	206 aa		0.84	□□□□□ -2.27
CSN9	YDR179C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.84	□□□□□ -2.27
CSN9	YDR179C	FAA1	P30624	700 aa	Known RBP	0.83	□□□□□ -2.28
CSN9	YDR179C	YFL064C	P43540	174 aa		0.83	□□□□□ -2.28
CSN9	YDR179C	YGR016W	P53209	190 aa		0.83	□□□□□ -2.28
CSN9	YDR179C	OSH6	Q02201	448 aa		0.83	□□□□□ -2.28
CSN9	YDR179C	SEC13	Q04491	297 aa	Known RBP	0.83	□□□□□ -2.28
CSN9	YDR179C	RDS3	Q06835	107 aa	Predicted RBP	0.83	□□□□□ -2.28
CSN9	YDR179C	RGS2	Q99188	309 aa		0.83	□□□□□ -2.28
CSN9	YDR179C	TDH1	P00360	332 aa	Known RBP	0.82	□□□□□ -2.28
CSN9	YDR179C	PXA2	P34230	853 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	MYO3	P36006	1272 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	TRM7	P38238	310 aa	Known RBP	0.82	□□□□□ -2.28
CSN9	YDR179C	YNR068C	P53754	272 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	NNT1	Q05874	261 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	DCR2	Q05924	578 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	YLR012C	Q07927	99 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	YOR292C	Q08743	309 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	EMC6	Q12431	108 aa		0.82	□□□□□ -2.28
CSN9	YDR179C	UBA1	P22515	1024 aa	Known RBP	0.81	□□□□□ -2.28
CSN9	YDR179C	IFM1	P25038	676 aa		0.81	□□□□□ -2.28
CSN9	YDR179C	ACB1	P31787	87 aa		0.81	□□□□□ -2.28
CSN9	YDR179C	MBA1	P38300	278 aa		0.81	□□□□□ -2.28
CSN9	YDR179C	GDI1	P39958	451 aa	Known RBP	0.81	□□□□□ -2.28
CSN9	YDR179C	SYS1	P41544	203 aa		0.81	□□□□□ -2.28
CSN9	YDR179C	YGR266W	P53326	701 aa		0.81	□□□□□ -2.28
CSN9	YDR179C	YHR086W-A	Q3E746	53 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms