RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PLEKHH3Q7Z736 793 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 EIF3CQ99613 913 aaKnown RBP17.94■□□□□ 0.46
PHGDH-216ENST00000641375 GANQ9H2C0 597 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 SMARCAD1Q9H4L7 1026 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 PCIF1Q9H4Z3 704 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 LZTFL1Q9NQ48 299 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 PDGFCQ9NRA1 345 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 GCNT4Q9P109 453 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 DNAI1Q9UI46 699 aa17.94■□□□□ 0.46
PHGDH-216ENST00000641375 TISP43B9A030 160 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 GAS2O43903 313 aaKnown RBP17.93■□□□□ 0.46
PHGDH-216ENST00000641375 MAFO75444 373 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-216ENST00000641375 ARL2P36404 184 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 LAMC2Q13753 1193 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 KLHDC7AQ5VTJ3 777 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 RASAL3Q86YV0 1011 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 RDH13Q8NBN7 331 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 TMEM143Q96AN5 459 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 SLC5A4Q9NY91 659 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 MYO6Q9UM54 1294 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 ADGRA3Q8IWK6 1321 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 RBM47A0AV96 593 aaKnown RBP17.93■□□□□ 0.46
PHGDH-216ENST00000641375 RIOK3O14730 519 aaKnown RBP17.93■□□□□ 0.46
PHGDH-216ENST00000641375 KIF5CO60282 957 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 UCHL3P15374 230 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 SLC9A1P19634 815 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 GNG11P61952 73 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 TAPT1Q6NXT6 567 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 ATP8B4Q8TF62 1192 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 DEF6Q9H4E7 631 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 ARHGAP20Q9P2F6 1191 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 ZNF236Q9UL36 1845 aa17.93■□□□□ 0.46
PHGDH-216ENST00000641375 SSU72P8A0A1W2PR75 194 aa17.92■□□□□ 0.46
PHGDH-216ENST00000641375 HNRNPDLO14979 420 aaKnown RBP17.92■□□□□ 0.46
PHGDH-216ENST00000641375 N4BP1O75113 896 aaKnown RBP17.92■□□□□ 0.46
PHGDH-216ENST00000641375 VAMP7P51809 220 aa17.92■□□□□ 0.46
PHGDH-216ENST00000641375 STRN3Q13033 797 aa17.92■□□□□ 0.46
PHGDH-216ENST00000641375 SLC9C1Q4G0N8 1177 aa17.92■□□□□ 0.46
PHGDH-216ENST00000641375 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-216ENST00000641375 DAAM1Q9Y4D1 1078 aa17.92■□□□□ 0.46
PHGDH-216ENST00000641375 GH1P01241 217 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 GLRA2P23416 452 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 ADSSP30520 456 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 GTF2F1P35269 517 aaKnown RBP eCLIP17.91■□□□□ 0.46
PHGDH-216ENST00000641375 CETN1Q12798 172 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 SPA17Q15506 151 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 DPY19L2P1Q6NXN4 242 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 ZNF662Q6ZS27 426 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 DEPTORQ8TB45 409 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 TCP11Q8WWU5 503 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 COPS5Q92905 334 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 JPH2Q9BR39 696 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-216ENST00000641375 HAUS4Q9H6D7 363 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 AIPL1Q9NZN9 384 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 MYO1AQ9UBC5 1043 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 SIP14410 1827 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 SLC15A5A6NIM6 579 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 ANKRD63C9JTQ0 380 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 P4HA2O15460 535 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 SERPING1P05155 500 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 GARTP22102 1010 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 MCCD1P59942 119 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-216ENST00000641375 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-216ENST00000641375 USP37Q86T82 979 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 SAPCD2Q86UD0 394 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 EMID1Q96A84 441 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-216ENST00000641375 BICD1Q96G01 975 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 MAML3Q96JK9 1138 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 SPAG5Q96R06 1193 aa17.91■□□□□ 0.46
PHGDH-216ENST00000641375 REXO2Q9Y3B8 237 aaKnown RBP17.91■□□□□ 0.46
PHGDH-216ENST00000641375 LRRIQ4A6NIV6 560 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 TRIM49P0CI25 452 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 TRIM49CP0CI26 452 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 ACTN1P12814 892 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 MARK3P27448 753 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 CASQ1P31415 396 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 INHBEP58166 350 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 MYL7Q01449 175 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 ARHGAP1Q07960 439 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 PLCB4Q15147 1175 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 SNRNP35Q16560 246 aaKnown RBP17.9■□□□□ 0.46
PHGDH-216ENST00000641375 IER5Q5VY09 327 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 RGMBQ6NW40 437 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
PHGDH-216ENST00000641375 ASAP3Q8TDY4 903 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 POMGNT1Q8WZA1 660 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 AKR1B10O60218 316 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 LCA5LO95447 670 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 PLEKP08567 350 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-216ENST00000641375 EIF4A3P38919 411 aaKnown RBP17.9■□□□□ 0.46
PHGDH-216ENST00000641375 KIF11P52732 1056 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 APBA1Q02410 837 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 RAPGEF1Q13905 1077 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 CBWD6Q4V339 395 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
PHGDH-216ENST00000641375 CBWD3Q5JTY5 395 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 CBWD5Q5RIA9 395 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 HGSNATQ68CP4 663 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 TAS1R3Q7RTX0 852 aa17.9■□□□□ 0.46
PHGDH-216ENST00000641375 KIAA1328Q86T90 577 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms