RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 CCDC40Q4G0X9 1142 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 NFRKBQ6P4R8 1299 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 MAP4K3Q8IVH8 894 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 LINC01465Q8N7H1 131 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 RNF149Q8NC42 400 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 KLHDC9Q8NEP7 349 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 BICD1Q96G01 975 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 MAP7D2Q96T17 732 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 PPP1R16BQ96T49 567 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 AGPAT3Q9NRZ7 376 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 HDAC6Q9UBN7 1215 aa19.31■□□□□ 0.68
PHGDH-214ENST00000641314 LIMA1Q9UHB6 759 aaKnown RBP19.31■□□□□ 0.68
PHGDH-214ENST00000641314 C17orf102A2RUQ5 167 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 TISP43B9A030 160 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 VTNP04004 478 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 CST5P28325 142 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-214ENST00000641314 ABCD1P33897 745 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 STRN3Q13033 797 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 TAS1R3Q7RTX0 852 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 RNF180Q86T96 592 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 ZC3H3Q8IXZ2 948 aaKnown RBP19.3■□□□□ 0.68
PHGDH-214ENST00000641314 DRC7Q8IY82 874 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 GOLGA5Q8TBA6 731 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 MRFAP1L1Q96HT8 127 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 CTAGE1Q96RT6 745 aa19.3■□□□□ 0.68
PHGDH-214ENST00000641314 SIP14410 1827 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 K7ERI5 159 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 ASAP2O43150 1006 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 MYCP01106 439 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-214ENST00000641314 CYP2J2P51589 502 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 COPB1P53618 953 aaKnown RBP19.29■□□□□ 0.68
PHGDH-214ENST00000641314 HIC1Q14526 733 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 CEP135Q66GS9 1140 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 APTXQ7Z2E3 356 aaKnown RBP19.29■□□□□ 0.68
PHGDH-214ENST00000641314 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 ZBTB8OSQ8IWT0 167 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 PCSK9Q8NBP7 692 aaKnown RBP19.29■□□□□ 0.68
PHGDH-214ENST00000641314 SPC24Q8NBT2 197 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 PDLIM2Q96JY6 352 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 PPP1R9BQ96SB3 815 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.29■□□□□ 0.685e-8■■□□□ 14.4
PHGDH-214ENST00000641314 FAM49AQ9H0Q0 323 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-214ENST00000641314 VPS16Q9H269 839 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 PHLPP2Q6ZVD8 1323 aa19.29■□□□□ 0.68
PHGDH-214ENST00000641314 PES1O00541 588 aaKnown RBP19.28■□□□□ 0.68
PHGDH-214ENST00000641314 TPM3P06753 285 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 CYP2C9P11712 490 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 PRKCSHP14314 528 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-214ENST00000641314 ZNF200P98182 395 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-214ENST00000641314 NBPF20Q3BBV1 942 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 SLC9C1Q4G0N8 1177 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 FILIP1LQ4L180 1135 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 TUBGCP2Q9BSJ2 902 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 UNC93B1Q9H1C4 597 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 C2orf40Q9H1Z8 148 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 HTTP42858 3142 aa19.28■□□□□ 0.68
PHGDH-214ENST00000641314 A0A1B0GTH6 734 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 MBLAC1A4D2B0 266 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-214ENST00000641314 ANKRD63C9JTQ0 380 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 HNRNPDLO14979 420 aaKnown RBP19.27■□□□□ 0.68
PHGDH-214ENST00000641314 N4BP3O15049 544 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 TPM2P07951 284 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 SCP2P22307 547 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 EFNA5P52803 228 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 NFIL3Q16649 462 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 PTPN21Q16825 1174 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 FAM47CQ5HY64 1035 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 LHX8Q68G74 356 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 CDCA2Q69YH5 1023 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-214ENST00000641314 CCSAPQ6IQ19 270 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-214ENST00000641314 ARMCX5Q6P1M9 558 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 RUFY4Q6ZNE9 571 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 KIAA0319LQ8IZA0 1049 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 SCLT1Q96NL6 688 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 PCIF1Q9H4Z3 704 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 TMEM134Q9H6X4 195 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 INTS13Q9NVM9 706 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 CGNQ9P2M7 1197 aaKnown RBP19.27■□□□□ 0.68
PHGDH-214ENST00000641314 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 FRMPD3Q5JV73 1810 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 SCN10AQ9Y5Y9 1956 aa19.27■□□□□ 0.68
PHGDH-214ENST00000641314 TREHO43280 583 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 GNA14O95837 355 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 EPB41P11171 864 aaKnown RBP19.27■□□□□ 0.67
PHGDH-214ENST00000641314 GNAT1P11488 350 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 CDC25BP30305 580 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 CASP4P49662 377 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 LIG4P49917 911 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.27■□□□□ 0.67
PHGDH-214ENST00000641314 VTI1AQ96AJ9 217 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 CBWD1Q9BRT8 395 aa19.27■□□□□ 0.67
PHGDH-214ENST00000641314 A0A087WZ62 844 aa19.26■□□□□ 0.67
PHGDH-214ENST00000641314 INO80B-WBP1J3KQ70 363 aa19.26■□□□□ 0.67
PHGDH-214ENST00000641314 AKAP3O75969 853 aa19.26■□□□□ 0.67
PHGDH-214ENST00000641314 HSPA8P11142 646 aaKnown RBP19.26■□□□□ 0.67
PHGDH-214ENST00000641314 PHKA2P46019 1235 aa19.26■□□□□ 0.67
PHGDH-214ENST00000641314 PTENP60484 403 aa19.26■□□□□ 0.67
PHGDH-214ENST00000641314 SNRPFP62306 86 aaKnown RBP19.26■□□□□ 0.67
PHGDH-214ENST00000641314 ADAM17P78536 824 aa19.26■□□□□ 0.67
PHGDH-214ENST00000641314 NLRP7Q8WX94 980 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms