RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 FAM105AQ9NUU6 356 aa15.56■□□□□ 0.08
LINC00339-211ENST00000641009 SPG21Q9NZD8 308 aa15.56■□□□□ 0.08
LINC00339-211ENST00000641009 PUF60Q9UHX1 559 aaKnown RBP15.56■□□□□ 0.08
LINC00339-211ENST00000641009 HIDE1A8MVS5 230 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 NT5C1B-RDH14C9J2C7 533 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 ALADP13716 330 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 RFC5P40937 340 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 KRT17Q04695 432 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 LAMTOR4Q0VGL1 99 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 TRIM29Q14134 588 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 EMC2Q15006 297 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 CALCRLQ16602 461 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 XKR9Q5GH70 373 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 OTUD6AQ7L8S5 288 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 SLC39A11Q8N1S5 342 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 POP1Q99575 1024 aaKnown RBP15.55■□□□□ 0.08
LINC00339-211ENST00000641009 EIF2AK1Q9BQI3 630 aaKnown RBP15.55■□□□□ 0.08
LINC00339-211ENST00000641009 MRPL9Q9BYD2 267 aaKnown RBP15.55■□□□□ 0.08
LINC00339-211ENST00000641009 MINDY3Q9H8M7 445 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 AGPAT5Q9NUQ2 364 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 PCDHA12Q9UN75 941 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 PPME1Q9Y570 386 aa15.55■□□□□ 0.08
LINC00339-211ENST00000641009 DCXO43602 365 aa15.54■□□□□ 0.08
LINC00339-211ENST00000641009 NEMFO60524 1076 aa15.54■□□□□ 0.08
LINC00339-211ENST00000641009 SLITRK3O94933 977 aa15.54■□□□□ 0.08
LINC00339-211ENST00000641009 BCAR1P56945 870 aa15.54■□□□□ 0.08
LINC00339-211ENST00000641009 TMC7Q7Z402 723 aa15.54■□□□□ 0.08
LINC00339-211ENST00000641009 EXOC8Q8IYI6 725 aa15.54■□□□□ 0.08
LINC00339-211ENST00000641009 CDCA3Q99618 268 aaPredicted RBP15.54■□□□□ 0.08
LINC00339-211ENST00000641009 TTC12Q9H892 705 aaPredicted RBP15.54■□□□□ 0.08
LINC00339-211ENST00000641009 INPP5FQ9Y2H2 1132 aa15.54■□□□□ 0.08
LINC00339-211ENST00000641009 USP15Q9Y4E8 981 aaPredicted RBP15.54■□□□□ 0.08
LINC00339-211ENST00000641009 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
LINC00339-211ENST00000641009 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.08
LINC00339-211ENST00000641009 SKIP12755 728 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 TXKP42681 527 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 ALDH7A1P49419 539 aaKnown RBP15.53■□□□□ 0.08
LINC00339-211ENST00000641009 GUCY1B3Q02153 619 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 KCNC3Q14003 757 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 LLGL2Q6P1M3 1020 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 SRGAP1Q7Z6B7 1085 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 FERMT3Q86UX7 667 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 RNF149Q8NC42 400 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 TCP11Q8WWU5 503 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 MTRQ99707 1265 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 NGRNQ9NPE2 291 aaKnown RBP15.53■□□□□ 0.08
LINC00339-211ENST00000641009 TECTAO75443 2155 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 MYO10Q9HD67 2058 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 MUC6Q6W4X9 2439 aa15.53■□□□□ 0.08
LINC00339-211ENST00000641009 FSD2A1L4K1 749 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 GAS2O43903 313 aaKnown RBP15.52■□□□□ 0.08
LINC00339-211ENST00000641009 ZNF623O75123 536 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 OFD1O75665 1012 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 RAB27AP51159 221 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 NOMO2Q5JPE7 1267 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 GLB1LQ6UWU2 654 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 TMEM173Q86WV6 379 aaPredicted RBP15.52■□□□□ 0.08
LINC00339-211ENST00000641009 RNF135Q8IUD6 432 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 CCDC83Q8IWF9 413 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 HSD17B14Q9BPX1 270 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 XPNPEP1Q9NQW7 623 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 TBC1D13Q9NVG8 400 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 MUTYHQ9UIF7 546 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 HCN4Q9Y3Q4 1203 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 PCDHB2Q9Y5E7 798 aa15.52■□□□□ 0.08
LINC00339-211ENST00000641009 A0A087WWV3 80 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 POTEMA6NI47 508 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 PRR33A8MZF0 331 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 ATP2B1P20020 1258 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 HOXA11P31270 313 aaPredicted RBP15.52■□□□□ 0.07
LINC00339-211ENST00000641009 TECP42680 631 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 SMC1AQ14683 1233 aaKnown RBP15.52■□□□□ 0.07
LINC00339-211ENST00000641009 AGMOQ6ZNB7 445 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 TMEM169Q96HH4 297 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 MTMR9Q96QG7 549 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 APOL5Q9BWW9 433 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 GBP3Q9H0R5 595 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 TMEM60Q9H2L4 133 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 NRDE2Q9H7Z3 1164 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 DNAJB4Q9UDY4 337 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 LIMCH1Q9UPQ0 1083 aa15.52■□□□□ 0.07
LINC00339-211ENST00000641009 ZNF318Q5VUA4 2279 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 C2orf71A6NGG8 1288 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 ASAP2O43150 1006 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 B4GALT3O60512 393 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 MCM7P33993 719 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 CA8P35219 290 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 AFF1P51825 1210 aaKnown RBP15.51■□□□□ 0.07
LINC00339-211ENST00000641009 RNASELQ05823 741 aaKnown RBP15.51■□□□□ 0.07
LINC00339-211ENST00000641009 UBXN11Q5T124 520 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 ANKRD54Q6NXT1 300 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 TMEM184AQ6ZMB5 413 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 MRPL43Q8N983 215 aaKnown RBP15.51■□□□□ 0.07
LINC00339-211ENST00000641009 BCL7CQ8WUZ0 217 aaPredicted RBP15.51■□□□□ 0.07
LINC00339-211ENST00000641009 RSPH1Q8WYR4 309 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 PGBD4Q96DM1 585 aa15.51■□□□□ 0.07
LINC00339-211ENST00000641009 C2orf16Q68DN1 1984 aa15.5■□□□□ 0.07
LINC00339-211ENST00000641009 ERLIN2O94905 339 aa15.5■□□□□ 0.07
LINC00339-211ENST00000641009 LYPLA2O95372 231 aa15.5■□□□□ 0.07
LINC00339-211ENST00000641009 GALTP07902 379 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms