RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 NOMO2Q5JPE7 1267 aa16.57■□□□□ 0.24
KCNC1-213ENST00000640909 NIPA1Q7RTP0 329 aa16.57■□□□□ 0.24
KCNC1-213ENST00000640909 SMG7Q92540 1137 aaKnown RBP16.57■□□□□ 0.24
KCNC1-213ENST00000640909 FAM167AQ96KS9 214 aa16.57■□□□□ 0.24
KCNC1-213ENST00000640909 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
KCNC1-213ENST00000640909 ZDHHC7Q9NXF8 308 aa16.57■□□□□ 0.24
KCNC1-213ENST00000640909 GTF3C3Q9Y5Q9 886 aa16.57■□□□□ 0.24
KCNC1-213ENST00000640909 NUMBLQ9Y6R0 609 aa16.57■□□□□ 0.24
KCNC1-213ENST00000640909 MEIS1O00470 390 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 FOXD2O60548 495 aaPredicted RBP16.56■□□□□ 0.24
KCNC1-213ENST00000640909 ATP4AP20648 1035 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 RPS9P46781 194 aaKnown RBP16.56■□□□□ 0.24
KCNC1-213ENST00000640909 RAB27AP51159 221 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 GPC3P51654 580 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 SHC2P98077 582 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 CDC42EP1Q00587 391 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 PFKPQ01813 784 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 MLF2Q15773 248 aaPredicted RBP16.56■□□□□ 0.24
KCNC1-213ENST00000640909 CKAP2LQ8IYA6 745 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 RPS6KC1Q96S38 1066 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 TMEM175Q9BSA9 504 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 SENP2Q9HC62 589 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 PARD6AQ9NPB6 346 aa16.56■□□□□ 0.24
KCNC1-213ENST00000640909 PRMT8Q9NR22 394 aaPredicted RBP16.56■□□□□ 0.24
KCNC1-213ENST00000640909 MTCL1Q9Y4B5 1905 aaKnown RBP16.56■□□□□ 0.24
KCNC1-213ENST00000640909 FAM208BQ5VWN6 2430 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 NCAM2O15394 837 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 LRRN2O75325 713 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 FOSP01100 380 aaPredicted RBP16.55■□□□□ 0.24
KCNC1-213ENST00000640909 SOD2P04179 222 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 SLC11A1P49279 550 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 LAIR1Q6GTX8 287 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 SWSAP1Q6NVH7 229 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 EFCAB12Q6NXP0 572 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 GET4Q7L5D6 327 aaPredicted RBP16.55■□□□□ 0.24
KCNC1-213ENST00000640909 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
KCNC1-213ENST00000640909 SMAP1Q8IYB5 467 aaPredicted RBP16.55■□□□□ 0.24
KCNC1-213ENST00000640909 PHKBQ93100 1093 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 ZNF707Q96C28 371 aaPredicted RBP16.55■□□□□ 0.24
KCNC1-213ENST00000640909 NELL2Q99435 816 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 DNAJB4Q9UDY4 337 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 RAB23Q9ULC3 237 aa16.55■□□□□ 0.24
KCNC1-213ENST00000640909 ZNF623O75123 536 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 UBXN2BQ14CS0 331 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 MTSS1LQ765P7 747 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 ZNF654Q8IZM8 581 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 URGCPQ8TCY9 931 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 CLDN23Q96B33 292 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 SCLT1Q96NL6 688 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 HERC2P3Q9BVR0 1158 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 LTB4R2Q9NPC1 389 aa16.54■□□□□ 0.24
KCNC1-213ENST00000640909 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
KCNC1-213ENST00000640909 ATRXP46100 2492 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 DDX39AO00148 427 aaKnown RBP16.53■□□□□ 0.24
KCNC1-213ENST00000640909 OFD1O75665 1012 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 RFPL2O75678 378 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 ALDH2P05091 517 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
KCNC1-213ENST00000640909 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
KCNC1-213ENST00000640909 PMLP29590 882 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 NRLP54845 237 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 GPC5P78333 572 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 SNW1Q13573 536 aaKnown RBP16.53■□□□□ 0.24
KCNC1-213ENST00000640909 ZBTB41Q5SVQ8 909 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 TWF2Q6IBS0 349 aaKnown RBP16.53■□□□□ 0.24
KCNC1-213ENST00000640909 ZNF746Q6NUN9 644 aaPredicted RBP16.53■□□□□ 0.24
KCNC1-213ENST00000640909 NCOA7Q8NI08 942 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 IER2Q9BTL4 223 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 RXFP1Q9HBX9 757 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 SH2B1Q9NRF2 756 aaPredicted RBP16.53■□□□□ 0.24
KCNC1-213ENST00000640909 FAM105AQ9NUU6 356 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 KANSL3Q9P2N6 904 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 WDR81Q562E7 1941 aa16.53■□□□□ 0.24
KCNC1-213ENST00000640909 FAM170BA6NMN3 283 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 TEX28O15482 410 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 DHX15O43143 795 aaKnown RBP16.52■□□□□ 0.24
KCNC1-213ENST00000640909 RETP07949 1114 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 SREBF1P36956 1147 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 AK2P54819 239 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 SPEM2Q0P670 501 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 MAMSTRQ6ZN01 415 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 GPR65Q8IYL9 337 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 LRRC71Q8N4P6 559 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 CELF5Q8N6W0 485 aaKnown RBP16.52■□□□□ 0.24
KCNC1-213ENST00000640909 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 NLRP7Q8WX94 980 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 FGF14Q92915 247 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 PGBD4Q96DM1 585 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.24
KCNC1-213ENST00000640909 PRKD2Q9BZL6 878 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 NT5C3AQ9H0P0 336 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 GBP3Q9H0R5 595 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 OSBPL3Q9H4L5 887 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 TBC1D22BQ9NU19 505 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 INPP5FQ9Y2H2 1132 aa16.52■□□□□ 0.24
KCNC1-213ENST00000640909 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.52■□□□□ 0.24
KCNC1-213ENST00000640909 CNTNAP2Q9UHC6 1331 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms