RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 USP18Q9UMW8 372 aa13.02□□□□□ -0.33
MECP2-226ENST00000640414 SMG5Q9UPR3 1016 aaKnown RBP13.02□□□□□ -0.33
MECP2-226ENST00000640414 PATJQ8NI35 1801 aa13.02□□□□□ -0.33
MECP2-226ENST00000640414 ZBTB42B2RXF5 422 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 ZBTB43O43298 467 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 HBP1O60381 514 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
MECP2-226ENST00000640414 VTNP04004 478 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
MECP2-226ENST00000640414 RXRAP19793 462 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 SLC26A2P50443 739 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 SCRN1Q12765 414 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 TROAPQ12815 778 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 PPM1JQ5JR12 505 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 CATIPQ7Z7H3 387 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 SECISBP2LQ93073 1101 aaKnown RBP13.01□□□□□ -0.33
MECP2-226ENST00000640414 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
MECP2-226ENST00000640414 WDR6Q9NNW5 1121 aaKnown RBP13.01□□□□□ -0.33
MECP2-226ENST00000640414 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
MECP2-226ENST00000640414 SPATA6Q9NWH7 488 aaPredicted RBP13.01□□□□□ -0.33
MECP2-226ENST00000640414 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
MECP2-226ENST00000640414 FBXO4Q9UKT5 387 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 PCDHGA2Q9Y5H1 932 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 COL1A2P08123 1366 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 COL4A3Q01955 1670 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 ATRXP46100 2492 aa13.01□□□□□ -0.33
MECP2-226ENST00000640414 MIA3Q5JRA6 1907 aa13□□□□□ -0.33
MECP2-226ENST00000640414 CLUHO75153 1309 aa13□□□□□ -0.33
MECP2-226ENST00000640414 NFASCO94856 1347 aa13□□□□□ -0.33
MECP2-226ENST00000640414 IGKV6D-21A0A0A0MT36 114 aa13□□□□□ -0.33
MECP2-226ENST00000640414 A0A0U1RQF3 1178 aa13□□□□□ -0.33
MECP2-226ENST00000640414 GOLGA8BA8MQT2 603 aa13□□□□□ -0.33
MECP2-226ENST00000640414 DTNBO60941 627 aa13□□□□□ -0.33
MECP2-226ENST00000640414 ATG7O95352 703 aa13□□□□□ -0.33
MECP2-226ENST00000640414 C22orf31O95567 290 aa13□□□□□ -0.33
MECP2-226ENST00000640414 CNPP09543 421 aaKnown RBP13□□□□□ -0.33
MECP2-226ENST00000640414 KLRC2P26717 231 aa13□□□□□ -0.33
MECP2-226ENST00000640414 ADD1P35611 737 aaKnown RBP13□□□□□ -0.33
MECP2-226ENST00000640414 STARD6P59095 220 aa13□□□□□ -0.33
MECP2-226ENST00000640414 CSTF1Q05048 431 aaKnown RBP13□□□□□ -0.33
MECP2-226ENST00000640414 MICU3Q86XE3 530 aa13□□□□□ -0.33
MECP2-226ENST00000640414 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
MECP2-226ENST00000640414 FANCBQ8NB91 859 aa13□□□□□ -0.33
MECP2-226ENST00000640414 ZBTB44Q8NCP5 570 aa13□□□□□ -0.33
MECP2-226ENST00000640414 CMASQ8NFW8 434 aaPredicted RBP13□□□□□ -0.33
MECP2-226ENST00000640414 ATRIPQ8WXE1 791 aa13□□□□□ -0.33
MECP2-226ENST00000640414 STAMQ92783 540 aa13□□□□□ -0.33
MECP2-226ENST00000640414 GTF3C6Q969F1 213 aa13□□□□□ -0.33
MECP2-226ENST00000640414 NXPE3Q969Y0 559 aa13□□□□□ -0.33
MECP2-226ENST00000640414 SDF4Q9BRK5 362 aa13□□□□□ -0.33
MECP2-226ENST00000640414 EPC1Q9H2F5 836 aa13□□□□□ -0.33
MECP2-226ENST00000640414 SLC2A4RGQ9NR83 387 aa13□□□□□ -0.33
MECP2-226ENST00000640414 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
MECP2-226ENST00000640414 LAMTOR5O43504 91 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 LILRB5O75023 590 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 CCNE2O96020 404 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
MECP2-226ENST00000640414 CDC27P30260 824 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 ITGB3BPQ13352 177 aaPredicted RBP12.99□□□□□ -0.33
MECP2-226ENST00000640414 UBE2SQ16763 222 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 ZNF484Q5JVG2 852 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 METTL13Q8N6R0 699 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 ST13P5Q8NFI4 369 aaPredicted RBP12.99□□□□□ -0.33
MECP2-226ENST00000640414 MXRA8Q9BRK3 442 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 EMILIN2Q9BXX0 1053 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 PSTPIP2Q9H939 334 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 DOCK8Q8NF50 2099 aa12.99□□□□□ -0.33
MECP2-226ENST00000640414 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 SPDYE3A6NKU9 549 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 ANHXE9PGG2 379 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 BACH1O14867 736 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 LILRB3O75022 631 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 DDAH1O94760 285 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 CTDNEP1O95476 244 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 SSBP05455 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
MECP2-226ENST00000640414 GALTP07902 379 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 RCAN1P53805 252 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 NLRP11P59045 1033 aaKnown RBP12.98□□□□□ -0.33
MECP2-226ENST00000640414 HTR4Q13639 388 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 CCDC60Q8IWA6 550 aaPredicted RBP12.98□□□□□ -0.33
MECP2-226ENST00000640414 NELL1Q92832 810 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 RRP36Q96EU6 259 aaKnown RBP12.98□□□□□ -0.33
MECP2-226ENST00000640414 INTS4Q96HW7 963 aaKnown RBP12.98□□□□□ -0.33
MECP2-226ENST00000640414 BCO2Q9BYV7 579 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 RHOBTB2Q9BYZ6 727 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 ADAMTS10Q9H324 1103 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 NRDE2Q9H7Z3 1164 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 ZSCAN32Q9NX65 697 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 PCDHA6Q9UN73 950 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 PCDHA8Q9Y5H6 950 aa12.98□□□□□ -0.33
MECP2-226ENST00000640414 KANSL1LA0AUZ9 987 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 SLC30A4O14863 429 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 INPPL1O15357 1258 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 RFPL2O75678 378 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms