RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 KLRC2P26717 231 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 POLGP54098 1239 aaPredicted RBP16.87■□□□□ 0.29
SYNE2-228ENST00000639659 GIT2Q14161 759 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 URGCPQ8TCY9 931 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 SLC22A17Q8WUG5 538 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 NKD2Q969F2 451 aaPredicted RBP16.87■□□□□ 0.29
SYNE2-228ENST00000639659 RIT2Q99578 217 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 EMILIN2Q9BXX0 1053 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 SFXN1Q9H9B4 322 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 CHST12Q9NRB3 414 aa16.87■□□□□ 0.29
SYNE2-228ENST00000639659 DENND4AQ7Z401 1863 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 PTPRZ1P23471 2315 aaPredicted RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 PROB1E7EW31 1015 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 TDP2O95551 362 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 SKIP12755 728 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 NBL1P41271 181 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 TARBP2Q15633 366 aaKnown RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 PTPN14Q15678 1187 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 XKR3Q5GH77 459 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 PLA2G4FQ68DD2 849 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 CWF19L1Q69YN2 538 aaKnown RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 OTOP3Q7RTS5 596 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 PPFIBP1Q86W92 1011 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 TBCKQ8TEA7 893 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 FAM193BQ96PV7 902 aaPredicted RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 NCOA5Q9HCD5 579 aaKnown RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 BMP2KQ9NSY1 1161 aaPredicted RBP16.86■□□□□ 0.29
SYNE2-228ENST00000639659 USTQ9Y2C2 406 aa16.86■□□□□ 0.29
SYNE2-228ENST00000639659 B4GALT3O60512 393 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 RAB27AP51159 221 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 BMP2KLQ5H9B9 411 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 ZNF280BQ86YH2 543 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 SIX5Q8N196 739 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 PGBD4Q96DM1 585 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 C2orf16Q68DN1 1984 aa16.85■□□□□ 0.29
SYNE2-228ENST00000639659 PI15O43692 258 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 CDC45O75419 566 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 OFD1O75665 1012 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 GBP2P32456 591 aaPredicted RBP16.84■□□□□ 0.29
SYNE2-228ENST00000639659 CLCN5P51795 746 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 CDC42EP1Q00587 391 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 TDGQ13569 410 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 TSGA10IPQ3SY00 556 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 GPR149Q86SP6 731 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 ZNF410Q86VK4 478 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 ADSSL1Q8N142 457 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 KLHL5Q96PQ7 755 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 RNF26Q9BY78 433 aaPredicted RBP16.84■□□□□ 0.29
SYNE2-228ENST00000639659 NIFKQ9BYG3 293 aaKnown RBP16.84■□□□□ 0.29
SYNE2-228ENST00000639659 PRG3Q9Y2Y8 225 aaPredicted RBP16.84■□□□□ 0.29
SYNE2-228ENST00000639659 PCDHB2Q9Y5E7 798 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 IRAK3Q9Y616 596 aa16.84■□□□□ 0.29
SYNE2-228ENST00000639659 VPS13AQ96RL7 3174 aa16.83■□□□□ 0.29
SYNE2-228ENST00000639659 CARNS1A5YM72 827 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 EDIL3O43854 480 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 PSMD10O75832 226 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 POMCP01189 267 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 URODP06132 367 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 CFHP08603 1231 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 CNPP09543 421 aaKnown RBP16.83■□□□□ 0.28
SYNE2-228ENST00000639659 USP11P51784 963 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 CLCN4P51793 760 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 AK2P54819 239 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 RDM1Q8NG50 284 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 KCNG4Q8TDN1 519 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
SYNE2-228ENST00000639659 RSAD1Q9HA92 442 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 MAN1C1Q9NR34 630 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 MRPL17Q9NRX2 175 aaKnown RBP16.83■□□□□ 0.28
SYNE2-228ENST00000639659 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.28
SYNE2-228ENST00000639659 MYO15AQ9UKN7 3530 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 SPTBN4Q9H254 2564 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 NARSO43776 548 aaKnown RBP16.82■□□□□ 0.28
SYNE2-228ENST00000639659 MAFO75444 373 aaPredicted RBP16.82■□□□□ 0.28
SYNE2-228ENST00000639659 DDHD2O94830 711 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 SRGAP2CP0DJJ0 459 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 AOC1P19801 751 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 AFF1P51825 1210 aaKnown RBP16.82■□□□□ 0.28
SYNE2-228ENST00000639659 ANGPT1Q15389 498 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 AGMOQ6ZNB7 445 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 RSPH1Q8WYR4 309 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 KCNK12Q9HB15 430 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 DUSP12Q9UNI6 340 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 COL4A3BPQ9Y5P4 624 aa16.82■□□□□ 0.28
SYNE2-228ENST00000639659 NID2Q14112 1375 aa16.81■□□□□ 0.28
SYNE2-228ENST00000639659 IGKV6-21A0A0C4DH24 114 aa16.81■□□□□ 0.28
SYNE2-228ENST00000639659 STBD1O95210 358 aa16.81■□□□□ 0.28
SYNE2-228ENST00000639659 OR1G1P47890 313 aa16.81■□□□□ 0.28
SYNE2-228ENST00000639659 NPEPPSP55786 919 aa16.81■□□□□ 0.28
SYNE2-228ENST00000639659 Q4G0T1 1027 aa16.81■□□□□ 0.28
SYNE2-228ENST00000639659 CCDC105Q8IYK2 499 aa16.81■□□□□ 0.28
SYNE2-228ENST00000639659 TRIM22Q8IYM9 498 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms