RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 TCF25Q9BQ70 676 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 LRRC2Q9BYS8 371 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 ZMYND12Q9H0C1 365 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 IRF2BPLQ9H1B7 796 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 S1PR5Q9H228 398 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 NGRNQ9NPE2 291 aaKnown RBP6.22□□□□□ -1.41
PDE4D-229ENST00000638939 ANO2Q9NQ90 1003 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 ENTPD7Q9NQZ7 604 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 TBC1D22BQ9NU19 505 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 RNF19AQ9NV58 838 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 TYW1Q9NV66 732 aaKnown RBP6.22□□□□□ -1.41
PDE4D-229ENST00000638939 TMEM260Q9NX78 707 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 HCSTQ9UBK5 93 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 TCEAL9Q9UHQ7 104 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 GINS2Q9Y248 185 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 NR2E1Q9Y466 385 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 VWA8A3KMH1 1905 aa6.22□□□□□ -1.41
PDE4D-229ENST00000638939 CCDC196A0A1B0GTZ2 297 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 SMCO2A6NFE2 343 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 GOLGA8AA7E2F4 631 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 GOLGA8BA8MQT2 603 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 WDR64B1ANS9 1081 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 PER2O15055 1255 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 VTNP04004 478 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 PSAPP07602 524 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 HMGB1P09429 215 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 ATP4AP20648 1035 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 TMOD1P28289 359 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 CIITAP33076 1130 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 ZNF76P36508 570 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 VCPP55072 806 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 EXOSC10Q01780 885 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 ITIH3Q06033 890 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 MTMR3Q13615 1198 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 KRT32Q14532 448 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 SMC1AQ14683 1233 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 TSGA10IPQ3SY00 556 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 PLPP4Q5VZY2 271 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 SYCE2Q6PIF2 218 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 KCNT2Q6UVM3 1135 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 DHX32Q7L7V1 743 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 ECHDC2Q86YB7 292 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 CKAP2LQ8IYA6 745 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 UBALD2Q8IYN6 164 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 ABI1Q8IZP0 508 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 REXO1Q8N1G1 1221 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 MICAL1Q8TDZ2 1067 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 CASP10Q92851 521 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 LENG9Q96B70 501 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 RPGRIP1Q96KN7 1286 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 CASD1Q96PB1 797 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 ZNF577Q9BSK1 485 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 MRPL9Q9BYD2 267 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 ADAMTS10Q9H324 1103 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 PUF60Q9UHX1 559 aaKnown RBP6.21□□□□□ -1.42
PDE4D-229ENST00000638939 BRPF3Q9ULD4 1205 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 PCDHA10Q9Y5I2 948 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 CITO14578 2027 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 OTOGLQ3ZCN5 2332 aa6.21□□□□□ -1.42
PDE4D-229ENST00000638939 CEP250Q9BV73 2442 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 MYH11P35749 1972 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 A0A0U1RQF3 1178 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 KLF18A0A0U1RQI7 1052 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 C2orf71A6NGG8 1288 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 HIDE1A8MVS5 230 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 PROB1E7EW31 1015 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 EOMESO95936 686 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 DARSP14868 501 aaKnown RBP6.2□□□□□ -1.42
PDE4D-229ENST00000638939 ZSCAN20P17040 1043 aaPredicted RBP6.2□□□□□ -1.42
PDE4D-229ENST00000638939 EIF4BP23588 611 aaKnown RBP6.2□□□□□ -1.42
PDE4D-229ENST00000638939 GNA11P29992 359 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 CDC27P30260 824 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 SFNP31947 248 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 TECP42680 631 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 GPC3P51654 580 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 CLCN3P51790 818 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 JAK3P52333 1124 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 NLRP11P59045 1033 aaKnown RBP6.2□□□□□ -1.42
PDE4D-229ENST00000638939 PRKCEQ02156 737 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 GUCA2AQ02747 115 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 KRT17Q04695 432 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 APOBRQ0VD83 1088 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 CLLU1OSQ5K130 101 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 KIAA1841Q6NSI8 718 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 CES5AQ6NT32 575 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 SWSAP1Q6NVH7 229 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 LRRC55Q6ZSA7 311 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 ZNF598Q86UK7 904 aaKnown RBP6.2□□□□□ -1.42
PDE4D-229ENST00000638939 SLC39A11Q8N1S5 342 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 METTL13Q8N6R0 699 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 CCDC148Q8NFR7 591 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 RDM1Q8NG50 284 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 BICD2Q8TD16 824 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 SNX27Q96L92 541 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 PPP1R16BQ96T49 567 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 RIT2Q99578 217 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 ADAM7Q9H2U9 754 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 POMKQ9H5K3 350 aa6.2□□□□□ -1.42
PDE4D-229ENST00000638939 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms