RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	TROAP	Q12815	778 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	SLC44A4	Q53GD3	710 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	NOMO2	Q5JPE7	1267 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	ZBTB41	Q5SVQ8	909 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	ANKRD45	Q5TZF3	282 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	LAIR1	Q6GTX8	287 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	SWSAP1	Q6NVH7	229 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	PARM1	Q6UWI2	310 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	GLB1L	Q6UWU2	654 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	CWC27	Q6UX04	472 aa	Known RBP	13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	ABHD15	Q6UXT9	468 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	CYP26C1	Q6V0L0	522 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	PRR23B	Q6ZRT6	265 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	TICAM2	Q86XR7	235 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	LRRC71	Q8N4P6	559 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	FGF14	Q92915	247 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	ZNF707	Q96C28	371 aa	Predicted RBP	13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	MAP7D2	Q96T17	732 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	DDX23	Q9BUQ8	820 aa	Known RBP	13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	LTB4R2	Q9NPC1	389 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	DACT1	Q9NYF0	836 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	DPP7	Q9UHL4	492 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	ZZEF1	O43149	2961 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	ERICH2	A1L162	156 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	MEIS3P2	A8K0S8	358 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	TEX28	O15482	410 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	B4GALT3	O60512	393 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	GLUD1	P00367	558 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	ATP4A	P20648	1035 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	MAGEA9	P43362	315 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	PHKA2	P46019	1235 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	PRKCQ	Q04759	706 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	EFCAB12	Q6NXP0	572 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	PRR23C	Q6ZRP0	262 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	ZNF280B	Q86YH2	543 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	OSBPL6	Q9BZF3	934 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	AGO4	Q9HCK5	861 aa	Known RBP	13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	SEMA4G	Q9NTN9	838 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	MYH15	Q9Y2K3	1946 aa		13.31	□□□□□ -0.28
PAX6-238	ENST00000638755	UROD	P06132	367 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	PROS1	P07225	676 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	RET	P07949	1114 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	DARS	P14868	501 aa	Known RBP	13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	SHC2	P98077	582 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	IL31	Q6EBC2	164 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	MIS18BP1	Q6P0N0	1132 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	CATIP	Q7Z7H3	387 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	NLRP7	Q8WX94	980 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	DDX1	Q92499	740 aa	Known RBP	13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	MYL10	Q9BUA6	226 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	DSCC1	Q9BVC3	393 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	SPZ1	Q9BXG8	430 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	RHOBTB2	Q9BYZ6	727 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	NT5C3A	Q9H0P0	336 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	PRMT8	Q9NR22	394 aa	Predicted RBP	13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	STK39	Q9UEW8	545 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	PCDHB15	Q9Y5E8	787 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	SPEG	Q15772	3267 aa		13.3	□□□□□ -0.28
PAX6-238	ENST00000638755	TMOD1	P28289	359 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	TRDN	Q13061	729 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	MTAP	Q13126	283 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	TWF2	Q6IBS0	349 aa	Known RBP	13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	TAS1R1	Q7RTX1	841 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	PALB2	Q86YC2	1186 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	PGBD1	Q96JS3	809 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	RPS6KC1	Q96S38	1066 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	ZMIZ1	Q9ULJ6	1067 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	FAN1	Q9Y2M0	1017 aa		13.29	□□□□□ -0.28
PAX6-238	ENST00000638755	SETX	Q7Z333	2677 aa	Known RBP	13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	hCG_1642624	A0A1W2PR95	340 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	C1QTNF9B	B2RNN3	333 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	NCAM2	O15394	837 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	MAGEB2	O15479	319 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	LRP3	O75074	770 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	OFD1	O75665	1012 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	DDHD2	O94830	711 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	SOD2	P04179	222 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	ALDH2	P05091	517 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	C1QTNF9	P0C862	333 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	FSHR	P23945	695 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	TARS	P26639	723 aa	Known RBP	13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	GPC3	P51654	580 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	CSRP2	Q16527	193 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	CEP55	Q53EZ4	464 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	TPRG1	Q6ZUI0	275 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	CELF5	Q8N6W0	485 aa	Known RBP	13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	RSPH1	Q8WYR4	309 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	CLDN23	Q96B33	292 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	FAM193B	Q96PV7	902 aa	Predicted RBP	13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	DIAPH3	Q9NSV4	1193 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	RCAN3	Q9UKA8	241 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	RALGAPA1	Q6GYQ0	2036 aa		13.28	□□□□□ -0.28
PAX6-238	ENST00000638755	DOCK6	Q96HP0	2047 aa		13.27	□□□□□ -0.28
PAX6-238	ENST00000638755	IGF2R	P11717	2491 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	NRP1	O14786	923 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	GAS2	O43903	313 aa	Known RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	RPS9	P46781	194 aa	Known RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	GLUD2	P49448	558 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms