RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ZDHHC14Q8IZN3 488 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 PRELID2Q8N945 189 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 SLC20A1Q8WUM9 679 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 N4BP2L2Q92802 583 aaPredicted RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 FAM20AQ96MK3 541 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 ELAC2Q9BQ52 826 aaKnown RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 DNAJC18Q9H819 358 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 APEX2Q9UBZ4 518 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 C21orf2O43822 256 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 HOXA13P31271 388 aaPredicted RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 SREBF1P36956 1147 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 FAM182BQ5T319 152 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 RPAINQ86UA6 219 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 ZFPM1Q8IX07 1006 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 ANKS4BQ8N8V4 417 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 AHDC1Q5TGY3 1603 aaPredicted RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 GREB1LQ9C091 1923 aaPredicted RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 FOXN3O00409 490 aaPredicted RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 EIF3DO15371 548 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 ASAP2O43150 1006 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 HLA-DOAP06340 250 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 GAP43P17677 238 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 DRG2P55039 364 aaKnown RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 MYL7Q01449 175 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 CCDC38Q502W7 563 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 PHLDB3Q6NSJ2 640 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 CDC42EP5Q6NZY7 148 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 PIGWQ7Z7B1 504 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 RDH13Q8NBN7 331 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 POLR3CQ9BUI4 534 aaPredicted RBP11.79□□□□□ -0.52
SNIP1-204ENST00000638725 CCDC113Q9H0I3 377 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 ANKRD63C9JTQ0 380 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 CHMP2AO43633 222 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 ATP6V1G2O95670 118 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 AGTP01019 485 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 VIMP08670 466 aaKnown RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 CRY2Q49AN0 593 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 FAM133BQ5BKY9 247 aaKnown RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 TAX1BP1Q86VP1 789 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 TPH2Q8IWU9 490 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 MAGEC3Q8TD91 643 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 AGPAT1Q99943 283 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 TACO1Q9BSH4 297 aaKnown RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 MKNK1Q9BUB5 465 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 AMNQ9BXJ7 453 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 SAMD15Q9P1V8 674 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 BAIAP2L1Q9UHR4 511 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 SLC12A4Q9UP95 1085 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 ADAMTSL1Q8N6G6 1762 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 SYNGAP1Q96PV0 1343 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 EZRP15311 586 aaKnown RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 CHRNA3P32297 505 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 ZNF76P36508 570 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 ADCY2Q08462 1091 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 ZNF746Q6NUN9 644 aaPredicted RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 C1orf186Q6ZWK4 172 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 COL23A1Q86Y22 540 aaPredicted RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 DCAF4Q8WV16 495 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 FIZ1Q96SL8 496 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 NOD2Q9HC29 1040 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 AGPAT3Q9NRZ7 376 aa11.78□□□□□ -0.52
SNIP1-204ENST00000638725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
SNIP1-204ENST00000638725 TCRBV7S2A1N4TA0A589 114 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 FTLP02792 175 aaPredicted RBP11.77□□□□□ -0.53
SNIP1-204ENST00000638725 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
SNIP1-204ENST00000638725 ITIH4Q14624 930 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 KIF22Q14807 665 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CCDC137Q6PK04 289 aaKnown RBP11.77□□□□□ -0.53
SNIP1-204ENST00000638725 HS2ST1Q7LGA3 356 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 FBXO11Q86XK2 927 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CPNE8Q86YQ8 564 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 RHOT2Q8IXI1 618 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CCDC63Q8NA47 563 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 BANK1Q8NDB2 785 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 TCP11Q8WWU5 503 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 ZSWIM1Q9BR11 485 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 PARVGQ9HBI0 331 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 ABCF3Q9NUQ8 709 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 MTRF1LQ9UGC7 380 aaKnown RBP11.77□□□□□ -0.53
SNIP1-204ENST00000638725 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 PTPN22Q9Y2R2 807 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 PCDHA3Q9Y5H8 950 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 BTAF1O14981 1849 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 RIPK2O43353 540 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CIITAP33076 1130 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CACNB3P54284 484 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 AUHQ13825 339 aaKnown RBP11.77□□□□□ -0.53
SNIP1-204ENST00000638725 MESDQ14696 234 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 NFIL3Q16649 462 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 TBC1D1Q86TI0 1168 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms