RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-215	ENST00000638589	GPR135	Q8IZ08	494 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CFHR4	Q92496	578 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	PGBD4	Q96DM1	585 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	WWC2-AS2	Q96NR7	200 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FOXB1	Q99853	325 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	MEGF9	Q9H1U4	602 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TLR9	Q9NR96	1032 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	DNAJC28	Q9NX36	388 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	DENND2A	Q9ULE3	1009 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CARMIL1	Q5VZK9	1371 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TDRD9	Q8NDG6	1382 aa	Known RBP	4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	GPR42	O15529	346 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	XPOT	O43592	962 aa	Known RBP	4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FOXS1	O43638	330 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	NPTXR	O95502	500 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	GJA9	P57773	515 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	EIF4H	Q15056	248 aa	Known RBP	4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ACAP2	Q15057	778 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	EPHA7	Q15375	998 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ZNF585A	Q6P3V2	769 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589		Q6ZVL8	140 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	GPHA2	Q96T91	129 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TUBD1	Q9UJT1	453 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	NUB1	Q9Y5A7	615 aa		4.56	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FHAD1	B1AJZ9	1412 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	AQR	O60306	1485 aa	Known RBP eCLIP	4.55	□□□□□ -1.68	4e-8	■■□□□ 11.4
HNRNPU-215	ENST00000638589	SNAPC4	Q5SXM2	1469 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	SAMD9	Q5K651	1589 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	hCG_2014768	A0A024R1R8	64 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TPD52L2	O43399	206 aa	Known RBP	4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CDC14B	O60729	498 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TMEM127	O75204	238 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CNOT4	O95628	575 aa	Known RBP	4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CD40	P25942	277 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ZEB1	P37275	1124 aa	Predicted RBP	4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CASR	P41180	1078 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	KIAA1841	Q6NSI8	718 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	RIN2	Q8WYP3	895 aa	Predicted RBP	4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TSR2	Q969E8	191 aa	Known RBP	4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FERMT2	Q96AC1	680 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ADAM29	Q9UKF5	820 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CHD1	O14646	1710 aa		4.55	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FZD9	O00144	591 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ZEB2	O60315	1214 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	LSP1	P33241	339 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FNTB	P49356	437 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CATIP	Q7Z7H3	387 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TAX1BP1	Q86VP1	789 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	SPATS2	Q86XZ4	545 aa	Known RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	KIF18B	Q86Y91	864 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	RTKN2	Q8IZC4	609 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	JADE3	Q92613	823 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	NKD2	Q969F2	451 aa	Predicted RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	OR14A2	Q96R54	314 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	BARX1	Q9HBU1	254 aa	Predicted RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	PRKAB1	Q9Y478	270 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	PCDHB6	Q9Y5E3	794 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	EFCAB5	A4FU69	1503 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	LY86	O95711	162 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FPR1	P21462	350 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ENPP1	P22413	925 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ICAM4	Q14773	271 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FSCN1	Q16658	493 aa	Known RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	AGBL4	Q5VU57	503 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TMEM200B	Q69YZ2	307 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TRIM68	Q6AZZ1	485 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	KCNK18	Q7Z418	384 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	PALM2	Q8IXS6	379 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	WDR48	Q8TAF3	677 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	MYOC	Q99972	504 aa		4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	C12orf65	Q9H3J6	166 aa	Known RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	NOP58	Q9Y2X3	529 aa	Known RBP	4.54	□□□□□ -1.68
HNRNPU-215	ENST00000638589	PLEKHD1	A6NEE1	506 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	BRINP1	O60477	761 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	INAVA	Q3KP66	663 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	UBXN11	Q5T124	520 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ANKS6	Q68DC2	871 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CALML6	Q8TD86	181 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	WDR92	Q96MX6	357 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	DDX56	Q9NY93	547 aa	Known RBP	4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	INTU	Q9ULD6	942 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	DNM3	Q9UQ16	869 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	NR2E1	Q9Y466	385 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	SYNJ2	O15056	1496 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	GRIN2A	Q12879	1464 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	ARAP1	Q96P48	1450 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	IQGAP2	Q13576	1575 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CEP170	Q5SW79	1584 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	CLIP1	P30622	1438 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	SASH1	O94885	1247 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	PARN	O95453	639 aa	Known RBP	4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	PPP3CA	Q08209	521 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	UGT8	Q16880	541 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	SYDE2	Q5VT97	1194 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	TCTN3	Q6NUS6	607 aa		4.53	□□□□□ -1.68
HNRNPU-215	ENST00000638589	FRMD7	Q6ZUT3	714 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms