RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 KMT5AQ9NQR1 393 aa13.91□□□□□ -0.18
UBE3A-228ENST00000638155 AFF4Q9UHB7 1163 aaKnown RBP13.91□□□□□ -0.18
UBE3A-228ENST00000638155 KRT74Q7RTS7 529 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 DHX36Q9H2U1 1008 aaKnown RBP13.9□□□□□ -0.18
UBE3A-228ENST00000638155 M0R2C6 588 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 PDE5AO76074 875 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 COPB2P35606 906 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 MAN2A1Q16706 1144 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 MEI1Q5TIA1 1274 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 KRT78Q8N1N4 520 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 IMPAD1Q9NX62 359 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 MAP3K5Q99683 1374 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 SAC3D1A6NKF1 404 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
UBE3A-228ENST00000638155 USP39Q53GS9 565 aaKnown RBP13.9□□□□□ -0.18
UBE3A-228ENST00000638155 DPP9Q86TI2 863 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 XAGE2Q96GT9 111 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 C17orf80Q9BSJ5 609 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 PLCH2O75038 1416 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 GGCXP38435 758 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 NDFIP2Q9NV92 336 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 THRAP3Q9Y2W1 955 aaKnown RBP13.9□□□□□ -0.18
UBE3A-228ENST00000638155 PIPSLA2A3N6 862 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 FLT3P36888 993 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 HSPA13P48723 471 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 RNF135Q8IUD6 432 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 KRT84Q9NSB2 600 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 NDUFA8P51970 172 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 PLOD1Q02809 727 aaPredicted RBP13.9□□□□□ -0.18
UBE3A-228ENST00000638155 UBE2OQ9C0C9 1292 aaKnown RBP13.9□□□□□ -0.18
UBE3A-228ENST00000638155 TMEM206Q9H813 350 aa13.9□□□□□ -0.18
UBE3A-228ENST00000638155 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 PLIN5Q00G26 463 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SPATA5Q8NB90 893 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SLC13A1Q9BZW2 595 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 WWP1Q9H0M0 922 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CFAP99D6REC4 459 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CCDC188H7C350 402 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CHRNA2Q15822 529 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ZNF827Q17R98 1081 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SMAD5Q99717 465 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 USP40Q9NVE5 1235 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ZNF197O14709 1029 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CLASP2O75122 1294 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 POLA2Q14181 598 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 MRPL48Q96GC5 212 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 HPS4Q9NQG7 708 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 MED23Q9ULK4 1368 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 JAK2O60674 1132 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 MYL1P05976 194 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ENO1P06733 434 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 RPS6P62753 249 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SLC25A24Q6NUK1 477 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 NLRP14Q86W24 1093 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 RHOT2Q8IXI1 618 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ZNF654Q8IZM8 581 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 OR8H2Q8N162 312 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 IARS2Q9NSE4 1012 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 PHKA1P46020 1223 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CCNA1P78396 465 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 MROH5Q6ZUA9 1318 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ASNA1O43681 348 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 RGS20O76081 388 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CUL4AQ13619 759 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SRLQ86TD4 932 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 TTC13Q8NBP0 860 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 PPP1R36Q96LQ0 422 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ABCB6Q9NP58 842 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 TMA7Q9Y2S6 64 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 NCOA1Q15788 1441 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 STX7O15400 261 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 GCFC2P16383 781 aaKnown RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 NCKAP1LP55160 1127 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ARPP19P56211 112 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 LRRC36Q1X8D7 754 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CCDC144BQ3MJ40 725 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 DNAL1Q4LDG9 190 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 WLSQ5T9L3 541 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CCDC81Q6ZN84 652 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 PLA2G4DQ86XP0 818 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 GLMNQ92990 594 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ZNF274Q96GC6 653 aaPredicted RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SERHL2Q9H4I8 314 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 SERHLQ9NQF3 203 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
UBE3A-228ENST00000638155 DTNAQ9Y4J8 743 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 ZNF532Q9HCE3 1301 aa13.89□□□□□ -0.19
UBE3A-228ENST00000638155 KDSRQ06136 332 aa13.88□□□□□ -0.19
UBE3A-228ENST00000638155 OR6B2Q6IFH4 312 aa13.88□□□□□ -0.19
UBE3A-228ENST00000638155 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
UBE3A-228ENST00000638155 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
UBE3A-228ENST00000638155 SNRNP27Q8WVK2 155 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms