RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 C11orf16Q9NQ32 467 aa14.68□□□□□ -0.06
SYNGAP1-224ENST00000637721 GJB4Q9NTQ9 266 aa14.68□□□□□ -0.06
SYNGAP1-224ENST00000637721 AGPAT5Q9NUQ2 364 aa14.68□□□□□ -0.06
SYNGAP1-224ENST00000637721 FAM105AQ9NUU6 356 aa14.68□□□□□ -0.06
SYNGAP1-224ENST00000637721 PCDHA12Q9UN75 941 aa14.68□□□□□ -0.06
SYNGAP1-224ENST00000637721 CNTNAP2Q9UHC6 1331 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 ARID2Q68CP9 1835 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 GLP2RO95838 553 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 HOXB8P17481 243 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 NPEPPSP55786 919 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 POU5F1BQ06416 359 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 GIT2Q14161 759 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 MXD4Q14582 209 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 SMC1AQ14683 1233 aaKnown RBP14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 EMC2Q15006 297 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 SAFBQ15424 915 aaKnown RBP eCLIP14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 CALCRLQ16602 461 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 EARS2Q5JPH6 523 aaKnown RBP14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 PLPP4Q5VZY2 271 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 TMC7Q7Z402 723 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 DIS3L2Q8IYB7 885 aaKnown RBP14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 NECAB1Q8N987 351 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 CNNM3Q8NE01 707 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 PRPF31Q8WWY3 499 aaKnown RBP14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 DYDC2Q96IM9 177 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 TBC1D32Q96NH3 1257 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 MTRQ99707 1265 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 HCSTQ9UBK5 93 aa14.67□□□□□ -0.06
SYNGAP1-224ENST00000637721 PER2O15055 1255 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 NEMFO60524 1076 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 CSDE1O75534 798 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 DGAT1O75907 488 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 SLITRK3O94933 977 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 PLA2G5P39877 138 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 BCAR1P56945 870 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 NCBP1Q09161 790 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 LAMTOR4Q0VGL1 99 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 ORC2Q13416 577 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 KCNC3Q14003 757 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 XKR9Q5GH70 373 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 HERC4Q5GLZ8 1057 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 FERMT3Q86UX7 667 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 KSR1Q8IVT5 923 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 CASP10Q92851 521 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 FAM122AQ96E09 287 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 CCDC51Q96ER9 411 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 HSD17B14Q9BPX1 270 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 EIF2AK1Q9BQI3 630 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 UPF2Q9HAU5 1272 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 UBN1Q9NPG3 1134 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 ANKEF1Q9NU02 776 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 KANSL3Q9P2N6 904 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 WRAP73Q9P2S5 460 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 BARX2Q9UMQ3 279 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 PCDHGC5Q9Y5F6 944 aa14.66□□□□□ -0.06
SYNGAP1-224ENST00000637721 BTBD18B2RXH4 712 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 LOC730098B7Z3J9 87 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 LARGE1O95461 756 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 SRGAP2CP0DJJ0 459 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 AXLP30530 894 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 TFDP1Q14186 410 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 CTTNQ14247 550 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 CBX2Q14781 532 aaPredicted RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 NOMO2Q5JPE7 1267 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 MRPL10Q7Z7H8 261 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 TPH2Q8IWU9 490 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 MRPL43Q8N983 215 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 URGCPQ8TCY9 931 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 SUSD6Q92537 303 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 TMEM143Q96AN5 459 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 LLPHQ9BRT6 129 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 TTC12Q9H892 705 aaPredicted RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 RGL1Q9NZL6 768 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 LIMCH1Q9UPQ0 1083 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 USP15Q9Y4E8 981 aaPredicted RBP14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 PCDHB2Q9Y5E7 798 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 IRAK3Q9Y616 596 aa14.65□□□□□ -0.06
SYNGAP1-224ENST00000637721 FAM86C2PA6NEL3 165 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 FAM205CA6NFA0 338 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 HIDE1A8MVS5 230 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 ZC3H11AO75152 810 aaKnown RBP eCLIP14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 OFD1O75665 1012 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 CYP4A11Q02928 519 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 RNASELQ05823 741 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 ANKRD54Q6NXT1 300 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 RNF135Q8IUD6 432 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 RNF149Q8NC42 400 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 MTMR9Q96QG7 549 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 TMEM175Q9BSA9 504 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 NFKBIZQ9BYH8 718 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 KCNH6Q9H252 994 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 TBC1D13Q9NVG8 400 aa14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 DAXXQ9UER7 740 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-224ENST00000637721 MUC6Q6W4X9 2439 aa14.63□□□□□ -0.07
SYNGAP1-224ENST00000637721 C2orf71A6NGG8 1288 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms