RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 SCRN1Q12765 414 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 MAP3K12Q12852 859 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 MRPL28Q13084 256 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 PRPF4BQ13523 1007 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 TMEM266Q2M3C6 531 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 C5orf22Q49AR2 442 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ANKRD39Q53RE8 183 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 SULT6B1Q6IMI4 303 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 KLHL10Q6JEL2 608 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 TATDN1Q6P1N9 297 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 C16orf87Q6PH81 154 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 SHQ1Q6PI26 577 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ADGRD1Q6QNK2 874 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 RSPO2Q6UXX9 243 aaPredicted RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 HFE2Q6ZVN8 426 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 VN1R5Q7Z5H4 357 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 C12orf40Q86WS4 652 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 MCATQ8IVS2 390 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CEP97Q8IW35 865 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 UNC45BQ8IWX7 931 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ZNF687Q8N1G0 1237 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CEP70Q8NHQ1 597 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 BAHD1Q8TBE0 780 aaPredicted RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 PANK1Q8TE04 598 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 UTP15Q8TED0 518 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 RSAD2Q8WXG1 361 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 HERVK_113Q902F9 699 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ST8SIA4Q92187 359 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 FBXW5Q969U6 566 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 NSUN4Q96CB9 384 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ZDHHC15Q96MV8 337 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC43Q96MW1 224 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 PIGSQ96S52 555 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ORAI2Q96SN7 254 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ELF4Q99607 663 aaPredicted RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 HEPHQ9BQS7 1158 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CORO1BQ9BR76 489 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 MXD3Q9BW11 206 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 COLEC11Q9BWP8 271 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 AGXT2Q9BYV1 514 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 TRIM5Q9C035 493 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 C2orf40Q9H1Z8 148 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 OR10A4Q9H209 315 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 C14orf93Q9H972 538 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ZMAT3Q9HA38 289 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 SP110Q9HB58 689 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 EIF2B3Q9NR50 452 aaKnown RBP3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 TJP2Q9UDY2 1190 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 SH3BGRL2Q9UJC5 107 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 FBXL5Q9UKA1 691 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 FBXL21Q9UKT6 434 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 SOX13Q9UN79 622 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 TMEM5Q9Y2B1 443 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 ATP23Q9Y6H3 246 aa3.82□□□□□ -1.8
CHRNA4-220ENST00000637628 CCDC154A6NI56 674 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 AQP12BA6NM10 295 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 TMEM110-MUSTN1A8MSY1 372 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 F8W031 263 aaPredicted RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 ELL2O00472 640 aaPredicted RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 NDC80O14777 642 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 IPO8O15397 1037 aaKnown RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 MEFVO15553 781 aaPredicted RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 ARHGAP6O43182 974 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 SIAH2O43255 324 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 MTSS1O43312 755 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 HRO43593 1189 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 ZNF862O60290 1169 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 PTP4A3O75365 173 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 SLU7O95391 586 aaKnown RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 PLATP00750 562 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 FTLP02792 175 aaPredicted RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 ADRB2P07550 413 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 RARBP10826 455 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 YBX3P16989 372 aaKnown RBP eCLIP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 PAMP19021 973 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 IL11P20809 199 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 RXRBP28702 533 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 SLC7A1P30825 629 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 HADHAP40939 763 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 AFMP43652 599 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 CLCN2P51788 898 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 SLC5A3P53794 718 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 RCAN1P53805 252 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 CSE1LP55060 971 aaKnown RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 RAB1AP62820 205 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 VAMP2P63027 116 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 IFI35P80217 286 aaPredicted RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 GSTM4Q03013 218 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 UBE3AQ05086 875 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 IFT88Q13099 833 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 CHAF1BQ13112 559 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 SLC12A1Q13621 1099 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 AUHQ13825 339 aaKnown RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 IKBKEQ14164 716 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 SEMA3AQ14563 771 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 PPA1Q15181 289 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 TAF7Q15545 349 aaPredicted RBP3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 CRY1Q16526 586 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 UGT8Q16880 541 aa3.81□□□□□ -1.8
CHRNA4-220ENST00000637628 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms