RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 EDEM3Q9BZQ6 932 aa23.64■■□□□ 1.37
CHRNA7-228ENST00000637519 ARHGAP28Q9P2N2 729 aa23.64■■□□□ 1.37
CHRNA7-228ENST00000637519 LRRIQ4A6NIV6 560 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 IGF2BP3O00425 579 aaKnown RBP eCLIP23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 KIF11P52732 1056 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 TTLL4Q14679 1199 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 TAPT1Q6NXT6 567 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 RASAL3Q86YV0 1011 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 CCDC170Q8IYT3 715 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 LRRN2O75325 713 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 ZNF157P51786 506 aaPredicted RBP23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 RTP1P59025 263 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 MYBPC2Q14324 1141 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 SCFD2Q8WU76 684 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 TRAPPC12Q8WVT3 735 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 BICD1Q96G01 975 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 LACRTQ9GZZ8 138 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 DEF6Q9H4E7 631 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 PLCB1Q9NQ66 1216 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 NRBP2Q9NSY0 501 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 GUCA1BQ9UMX6 200 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 EXOC7Q9UPT5 735 aa23.63■■□□□ 1.37
CHRNA7-228ENST00000637519 EIF3CLB5ME19 914 aaKnown RBP23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 HNRNPDLO14979 420 aaKnown RBP23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 CASQ1P31415 396 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 ARL2P36404 184 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 ADCYAP1R1P41586 468 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 MYL7Q01449 175 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 PPP3CAQ08209 521 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 PPP2R5AQ15172 486 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 ZNF569Q5MCW4 686 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 C1orf220Q5T0J3 134 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 CHADLQ6NUI6 762 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 KIAA1328Q86T90 577 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 LRRN4CLQ8ND94 238 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 EIF3CQ99613 913 aaKnown RBP23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 EMSYQ7Z589 1322 aa23.62■■□□□ 1.37
CHRNA7-228ENST00000637519 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 URI1O94763 535 aaPredicted RBP23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 KRT13P13646 458 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 GTF2F1P35269 517 aaKnown RBP eCLIP23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 VAMP7P51809 220 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 GFPT1Q06210 699 aaPredicted RBP23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 FAM110CQ1W6H9 321 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 DPP9Q86TI2 863 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 LRRC71Q8N4P6 559 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 HVCN1Q96D96 273 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 ZBTB42B2RXF5 422 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 KIF5CO60282 957 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 LGR5O75473 907 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 SNAI1O95863 264 aaPredicted RBP23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 GCLMP48507 274 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 ARHGAP1Q07960 439 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 GRB14Q14449 540 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 NAA30Q147X3 362 aaPredicted RBP23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 PLCB4Q15147 1175 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 IQCEQ6IPM2 695 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 MAMDC4Q6UXC1 1216 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 SLC35F6Q8N357 371 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 POMGNT1Q8WZA1 660 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 CGNQ9P2M7 1197 aaKnown RBP23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 DUSP10Q9Y6W6 482 aa23.61■■□□□ 1.37
CHRNA7-228ENST00000637519 AKR1B10O60218 316 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 TUBB4AP04350 444 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 EDN1P05305 212 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 SNRNP35Q16560 246 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 INTS8Q75QN2 995 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 CCDC127Q96BQ5 260 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 FAM84AQ96KN4 292 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 SPAG5Q96R06 1193 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 KATNBL1Q9H079 304 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 SUGCTQ9HAC7 445 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 ZNF215Q9UL58 517 aaPredicted RBP23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 DIS3Q9Y2L1 958 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 GTPBP10A4D1E9 387 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 RFC5P40937 340 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 KRT83P78385 493 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 CAPSQ13938 189 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 CCDC122Q5T0U0 273 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 ABRAQ8N0Z2 381 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 NPLOC4Q8TAT6 608 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 JAKMIP2Q96AA8 810 aa23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 INTS2Q9H0H0 1204 aaKnown RBP23.6■■□□□ 1.37
CHRNA7-228ENST00000637519 STRNO43815 780 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 IPO7O95373 1038 aaKnown RBP23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 MKRN4PQ13434 485 aaPredicted RBP23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 ASIC2Q16515 512 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 ASTE1Q2TB18 679 aaPredicted RBP23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 PLEKHH3Q7Z736 793 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 DEPTORQ8TB45 409 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 ATP8B4Q8TF62 1192 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 TMEM174Q8WUU8 243 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 MAML3Q96JK9 1138 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 ZNF668Q96K58 619 aaPredicted RBP23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 POP1Q99575 1024 aaKnown RBP23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 L2HGDHQ9H9P8 463 aa23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHRNA7-228ENST00000637519 TRPC6Q9Y210 931 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms