RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 MMP13P45452 471 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 KCNJ2P63252 427 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 NR1H3Q13133 447 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 ODR4Q5SWX8 454 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 FBXO33Q7Z6M2 555 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 CCDC24Q8N4L8 307 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 ATXN2LQ8WWM7 1075 aaKnown RBP9□□□□□ -0.97
SMARCA2-246ENST00000635739 TUBB6Q9BUF5 446 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 RXFP1Q9HBX9 757 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 IL17RBQ9NRM6 502 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 USH1CQ9Y6N9 552 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 SHBGP04278 402 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 RASA1P20936 1047 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 PDE6BP35913 854 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 SLC16A2P36021 539 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 BZW1Q7L1Q6 419 aaKnown RBP9□□□□□ -0.97
SMARCA2-246ENST00000635739 KSR1Q8IVT5 923 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 ERP27Q96DN0 273 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 ANO3Q9BYT9 981 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.977e-6■■■■■ 74.5
SMARCA2-246ENST00000635739 CTDP1Q9Y5B0 961 aaPredicted RBP9□□□□□ -0.97
SMARCA2-246ENST00000635739 FOSP01100 380 aaPredicted RBP9□□□□□ -0.97
SMARCA2-246ENST00000635739 CYP11B2P19099 503 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 POLD1P28340 1107 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 PRKCIP41743 596 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 CTCFP49711 727 aaPredicted RBP9□□□□□ -0.97
SMARCA2-246ENST00000635739 ANKRD20A2Q5SQ80 823 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 ANKRD20A1Q5TYW2 823 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 CYFIP1Q7L576 1253 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 CCDC89Q8N998 374 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 C18orf8Q96DM3 657 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 GANQ9H2C0 597 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 PARVGQ9HBI0 331 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 SFI1A8K8P3 1242 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 NOL4O94818 638 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
SMARCA2-246ENST00000635739 LIN9Q5TKA1 542 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 GJB7Q6PEY0 223 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 PHLDB2Q86SQ0 1253 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 AGPAT1Q99943 283 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 INTS2Q9H0H0 1204 aaKnown RBP9□□□□□ -0.97
SMARCA2-246ENST00000635739 VCX3BQ9H321 246 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 VCX3AQ9NNX9 186 aa9□□□□□ -0.97
SMARCA2-246ENST00000635739 DDX3XO00571 662 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 CHRM1P11229 460 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 ITIH2P19823 946 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 MAPK4P31152 587 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 KCNJ1P48048 391 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 SH3BGRP55822 239 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 KCNK18Q7Z418 384 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 PDCD7Q8N8D1 485 aaKnown RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 DNAJC9Q8WXX5 260 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 TLCD1Q96CP7 247 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 SNF8Q96H20 258 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 NDC80O14777 642 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 SLC26A4O43511 780 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 UFL1O94874 794 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 STAT3P40763 770 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 DRG2P55039 364 aaKnown RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 KRT17Q04695 432 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 STAT4Q14765 748 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 TMEM119Q4V9L6 283 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 MFSD14BQ5SR56 506 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 TBC1D9BQ66K14 1250 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 MAEAQ7L5Y9 396 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 IRF2BP2Q7Z5L9 587 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 APLFQ8IW19 511 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 MTMR9Q96QG7 549 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 HOMER2Q9NSB8 354 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USTQ9Y2C2 406 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L15C9J2P7 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L13C9JLJ4 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L11C9JVI0 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L18D6R9N7 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L22D6RA61 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L17D6RBQ6 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L19D6RCP7 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L20D6RJB6 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 ADAMTS3O15072 1205 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 MAP3K7O43318 606 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 RIPK2O43353 540 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 RFX1P22670 979 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 COILP38432 576 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 FMO5P49326 533 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 LMNB2Q03252 620 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L24Q0WX57 530 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 CNGA2Q16280 664 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 KYNUQ16719 465 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USH1GQ495M9 461 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 DUPD1Q68J44 220 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 ZNF746Q6NUN9 644 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 USP17L6PQ6QN14 398 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 KCTD1Q719H9 257 aa8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 ZC3H18Q86VM9 953 aaKnown RBP8.99□□□□□ -0.97
SMARCA2-246ENST00000635739 RASGEF1CQ8N431 466 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms