RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 EOMESO95936 686 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 SSBP05455 408 aaKnown RBP eCLIP23.11■■□□□ 1.29
SF1-221ENST00000633899 FGFR1P11362 822 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 GPM6BQ13491 265 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 HYIQ5T013 277 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 IFNLR1Q8IU57 520 aaPredicted RBP23.11■■□□□ 1.29
SF1-221ENST00000633899 KIFAP3Q92845 792 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 IFT74Q96LB3 600 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 PLIN2Q99541 437 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 NFKBIZQ9BYH8 718 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 FAM105AQ9NUU6 356 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 MTCH2Q9Y6C9 303 aa23.11■■□□□ 1.29
SF1-221ENST00000633899 RB1P06400 928 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 BMPR1AP36894 532 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 MBTD1Q05BQ5 628 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 PTPROQ16827 1216 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 CLP1Q92989 425 aaKnown RBP23.1■■□□□ 1.29
SF1-221ENST00000633899 C11orf84Q9BUA3 381 aaPredicted RBP23.1■■□□□ 1.29
SF1-221ENST00000633899 TMEM117Q9H0C3 514 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 C2orf40Q9H1Z8 148 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 AAASQ9NRG9 546 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 LMCD1Q9NZU5 365 aa23.1■■□□□ 1.29
SF1-221ENST00000633899 H3BNC9 293 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 LPXNO60711 386 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 POU3F3P20264 500 aaPredicted RBP23.09■■□□□ 1.29
SF1-221ENST00000633899 MARCKSP29966 332 aaPredicted RBP23.09■■□□□ 1.29
SF1-221ENST00000633899 AXLP30530 894 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 FOXD4L5Q5VV16 416 aaPredicted RBP23.09■■□□□ 1.29
SF1-221ENST00000633899 NOTUMQ6P988 496 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 DEPTORQ8TB45 409 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 FOXD4L4Q8WXT5 416 aaPredicted RBP23.09■■□□□ 1.29
SF1-221ENST00000633899 PGBD4Q96DM1 585 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 ZNF396Q96N95 335 aaPredicted RBP23.09■■□□□ 1.29
SF1-221ENST00000633899 PNMA5Q96PV4 448 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 TRAIPQ9BWF2 469 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 PLVAPQ9BX97 442 aa23.09■■□□□ 1.29
SF1-221ENST00000633899 PRRC2BQ5JSZ5 2229 aaKnown RBP23.09■■□□□ 1.29
SF1-221ENST00000633899 TRANK1O15050 2925 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 TSPAN1O60635 241 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 NAMPTP43490 491 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 PTPAQ15257 358 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 TMEM132AQ24JP5 1023 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 KCNK18Q7Z418 384 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 LRRC43Q8N309 656 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 USP28Q96RU2 1077 aa23.08■■□□□ 1.29
SF1-221ENST00000633899 C5orf67F2Z3F1 127 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 ZSCAN22P10073 491 aaPredicted RBP23.07■■□□□ 1.28
SF1-221ENST00000633899 TXLNAP40222 546 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 GRIN1Q05586 938 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 STK38Q15208 465 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 SKIV2LQ15477 1246 aaKnown RBP23.07■■□□□ 1.28
SF1-221ENST00000633899 TMEM119Q4V9L6 283 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 ZNF598Q86UK7 904 aaKnown RBP23.07■■□□□ 1.28
SF1-221ENST00000633899 SLC17A8Q8NDX2 589 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 HELQQ8TDG4 1101 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 CCDC51Q96ER9 411 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 CPB2Q96IY4 423 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 DRC1Q96MC2 740 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 RUSC1Q9BVN2 902 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 MRPL9Q9BYD2 267 aaKnown RBP23.07■■□□□ 1.28
SF1-221ENST00000633899 TRIM6Q9C030 488 aaPredicted RBP23.07■■□□□ 1.28
SF1-221ENST00000633899 PRMT7Q9NVM4 692 aaPredicted RBP23.07■■□□□ 1.28
SF1-221ENST00000633899 PCDHB2Q9Y5E7 798 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 PCDHB12Q9Y5F1 795 aa23.07■■□□□ 1.28
SF1-221ENST00000633899 PLA2G4BP0C869 781 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 ATF7P17544 494 aaPredicted RBP23.06■■□□□ 1.28
SF1-221ENST00000633899 LIG1P18858 919 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 HOXA11P31270 313 aaPredicted RBP23.06■■□□□ 1.28
SF1-221ENST00000633899 LONRF3Q496Y0 759 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 CDCA2Q69YH5 1023 aaPredicted RBP23.06■■□□□ 1.28
SF1-221ENST00000633899 RINT1Q6NUQ1 792 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 CNNM3Q8NE01 707 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 BSNDQ8WZ55 320 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 LPPQ93052 612 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 PRIMPOLQ96LW4 560 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 CASD1Q96PB1 797 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 TIPINQ9BVW5 301 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 CSRNP2Q9H175 543 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 POLD4Q9HCU8 107 aa23.06■■□□□ 1.28
SF1-221ENST00000633899 TYW1Q9NV66 732 aaKnown RBP23.06■■□□□ 1.28
SF1-221ENST00000633899 SRPRBQ9Y5M8 271 aaKnown RBP23.06■■□□□ 1.28
SF1-221ENST00000633899 CCDC169A6NNP5 214 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 ZNF623O75123 536 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 HIP1RO75146 1068 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 LINC00271P0C7V0 271 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 LAG3P18627 525 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 DMP1Q13316 513 aaPredicted RBP23.05■■□□□ 1.28
SF1-221ENST00000633899 BECN1Q14457 450 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 KARSQ15046 597 aaKnown RBP23.05■■□□□ 1.28
SF1-221ENST00000633899 MAPK6Q16659 721 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 NAALADL2Q58DX5 795 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 CLLU1OSQ5K130 101 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 GLB1LQ6UWU2 654 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 HACE1Q8IYU2 909 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 SYT2Q8N9I0 419 aaPredicted RBP23.05■■□□□ 1.28
SF1-221ENST00000633899 RSPH1Q8WYR4 309 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 P2RX5Q93086 422 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 RNF19AQ9NV58 838 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 CCDC39Q9UFE4 941 aa23.05■■□□□ 1.28
SF1-221ENST00000633899 FBXO2Q9UK22 296 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms