RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 APOA5Q6Q788 366 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 SAMD7Q7Z3H4 446 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ANKRD35Q8N283 1001 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ZSCAN1Q8NBB4 408 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 TTLL11Q8NHH1 800 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 PLBD2Q8NHP8 589 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 OSBP2Q969R2 916 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 NAF1Q96HR8 494 aaKnown RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 MAELQ96JY0 434 aaKnown RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 C16orf45Q96MC5 204 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 PPP1R9BQ96SB3 815 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 IRX2Q9BZI1 471 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 MROH8Q9H579 483 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 CNTD2Q9H8S5 307 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 PDE7BQ9NP56 450 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 RASAL2Q9UJF2 1139 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 INVSQ9Y283 1065 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 CNPY2Q9Y2B0 182 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 PCDHB14Q9Y5E9 798 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ZNF804BA4D1E1 1349 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 CDK12Q9NYV4 1490 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 RAPGEF6Q8TEU7 1601 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 TCRBV16S1A1N1A0A5B0 115 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 MEIS3P2A8K0S8 358 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 F8VZ95 297 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 RIPK2O43353 540 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 TSC22D2O75157 780 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 PTP4A3O75365 173 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 H2AFYO75367 372 aaKnown RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ULK1O75385 1050 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ATE1O95260 518 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 FGFR1OPO95684 399 aaKnown RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ACRP10323 421 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 MSH2P43246 934 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 SULT1E1P49888 294 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 PPP2R2AP63151 447 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 NAA25Q14CX7 972 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 SUPT20HL1Q3ZLR7 823 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ARSIQ5FYB1 569 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 AP1ARQ63HQ0 302 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 KIAA1211LQ6NV74 962 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ZNF438Q7Z4V0 828 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 GRAMD1CQ8IYS0 662 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC33Q8N5R6 958 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 COG3Q96JB2 828 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 VPS39Q96JC1 886 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 CCDC74BQ96LY2 380 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 FNBP1Q96RU3 617 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 NT5C3AQ9H0P0 336 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 SEMA4AQ9H3S1 761 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 PREBQ9HCU5 417 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 DDX18Q9NVP1 670 aaKnown RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 EXTL2Q9UBQ6 330 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ADD3Q9UEY8 706 aaKnown RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ADGRE2Q9UHX3 823 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 MAGED2Q9UNF1 606 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ADAMTS8Q9UP79 889 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 MRPL11Q9Y3B7 192 aaKnown RBP5.35□□□□□ -1.55
SDCBP-213ENST00000630925 JRKLQ9Y4A0 524 aa5.35□□□□□ -1.55
SDCBP-213ENST00000630925 ATP10AO60312 1499 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 UGGT2Q9NYU1 1516 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 H3BML4 177 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 UBE2CO00762 179 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 FFAR2O15552 330 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 OPN1MWP04001 364 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 GSNP06396 782 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 OPN1MW2P0DN77 364 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 OPN1MW3P0DN78 364 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 FGFR1P11362 822 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 PABPC1P11940 636 aaKnown RBP5.34□□□□□ -1.55
SDCBP-213ENST00000630925 TMEM11P17152 192 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 MAPK3P27361 379 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-213ENST00000630925 ATP5OP48047 213 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 VEGFBP49765 207 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 GPC3P51654 580 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 SNAPC2Q13487 334 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 IKBKEQ14164 716 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 ATP2B3Q16720 1220 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 KIF4BQ2VIQ3 1234 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 GGT6Q6P531 493 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 C11orf88Q6PI97 169 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 ZNF804AQ7Z570 1209 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 NLRP13Q86W25 1043 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 KIF18BQ86Y91 864 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 LRRC49Q8IUZ0 686 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 CMIPQ8IY22 773 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 GALNT15Q8N3T1 639 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 TSPYL6Q8N831 410 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 SPERTQ8NA61 448 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 ZFAND2BQ8WV99 257 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 PTP4A1Q93096 173 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 PHKBQ93100 1093 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 LTV1Q96GA3 475 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-213ENST00000630925 DHRS1Q96LJ7 313 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 VCPKMTQ9H867 229 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 PPP4R2Q9NY27 417 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 MOSPD1Q9UJG1 213 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 PADI4Q9UM07 663 aa5.34□□□□□ -1.55
SDCBP-213ENST00000630925 BARX2Q9UMQ3 279 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-213ENST00000630925 POLR3KQ9Y2Y1 108 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms