RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 YIPF2Q9BWQ6 316 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 UTYO14607 1347 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 A0A0G2JND7 137 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 GRAMD1BQ3KR37 738 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 RAPGEF5Q92565 580 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 NUP85Q9BW27 656 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 TRIM55Q9BYV6 548 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 RCOR1Q9UKL0 485 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 RESP18Q5W5W9 173 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 TAS2R42Q7RTR8 314 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 WDR75Q8IWA0 830 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 RNF168Q8IYW5 571 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 TTC13Q8NBP0 860 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 AATKQ6ZMQ8 1374 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 ERBB3P21860 1342 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 CCDC195A0A1B0GUA6 201 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 PFDN1O60925 122 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 PSMC1P62191 440 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 MRPS25P82663 173 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 KRT76Q01546 638 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 CUL1Q13616 776 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 SMAD1Q15797 465 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 EPM2AIP1Q7L775 607 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 RPAP3Q9H6T3 665 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 TRIM33Q9UPN9 1127 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 RPAP1Q9BWH6 1393 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 SRGAP2O75044 1071 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 RALAP11233 206 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 HEATR6Q6AI08 1181 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 TJP2Q9UDY2 1190 aa12.51□□□□□ -0.41
SHPRH-211ENST00000629427 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
SHPRH-211ENST00000629427 CFAP69A5D8W1 941 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 ZNF500O60304 480 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 NR1D1P20393 614 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 CC2D1AQ6P1N0 951 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 STAP1Q9ULZ2 295 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 APOBEC2Q9Y235 224 aaKnown RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 NEDD4P46934 1319 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 POTECB2RU33 542 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 NUGGCQ68CJ6 796 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 TRIM45Q9H8W5 580 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 RASA4BC9J798 803 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 RASA4O43374 803 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 SFNP31947 248 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 ZC3H12BQ5HYM0 836 aaKnown RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 POTEGQ6S5H5 508 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 SLC44A5Q8NCS7 719 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 PPARGC1AQ9UBK2 798 aaKnown RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 KPNA7A9QM74 516 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 DGKHQ86XP1 1220 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 SLC13A1Q9BZW2 595 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 TRPV6Q9H1D0 765 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 COL15A1P39059 1388 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 A8MXQ7 604 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 PIK3R2O00459 728 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 FSCBQ5H9T9 825 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 VSTM4Q8IW00 320 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 OR6P1Q8NGX9 317 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 RAD54LQ92698 747 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 TRIM54Q9BYV2 358 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 AFF2P51816 1311 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 SYF2O95926 243 aaKnown RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 SDC4P31431 198 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 GFPT1Q06210 699 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-211ENST00000629427 TFDP2Q14188 446 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 OTULINQ96BN8 352 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 RMDN1Q96DB5 314 aa12.5□□□□□ -0.41
SHPRH-211ENST00000629427 SNAP23O00161 211 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 COASYQ13057 564 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 PROM2Q8N271 834 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 EPAS1Q99814 870 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 CASS4Q9NQ75 786 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 RBAKQ9NYW8 714 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 CPDO75976 1380 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms