RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SLC9A9Q8IVB4 645 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 NELFCDQ8IXH7 590 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 C12orf56Q8IXR9 622 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 TMEM174Q8WUU8 243 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 SUCLA2Q9P2R7 463 aaPredicted RBP11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 TBX20Q9UMR3 447 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 AKT3Q9Y243 479 aa11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.13□□□□□ -0.63
FOXCUT-201ENST00000628509 SMIM35A0A1B0GVV1 85 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 KBTBD13C9JR72 458 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 PES1O00541 588 aaKnown RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 N4BP3O15049 544 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 MAPK13O15264 365 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 SLC16A4O15374 487 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 PRPF6O94906 941 aaKnown RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 INHAP05111 366 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 ZNF286BP0CG31 522 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 MYBP10242 640 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 ZNF18P17022 549 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 GARTP22102 1010 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 NMT1P30419 496 aaKnown RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 DEKP35659 375 aaKnown RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 PSMC2P35998 433 aaKnown RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 ENPEPQ07075 957 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 LRRC41Q15345 812 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 MAN2A1Q16706 1144 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 TMEM132AQ24JP5 1023 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 SLC9C1Q4G0N8 1177 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 CDKAL1Q5VV42 579 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 ARMCX5Q6P1M9 558 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 NFRKBQ6P4R8 1299 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 MTHFD1LQ6UB35 978 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 FRMD5Q7Z6J6 570 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 TRIM50Q86XT4 487 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 DAW1Q8N136 415 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 PRIMPOLQ96LW4 560 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 GLT1D1Q96MS3 346 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 MRPL4Q9BYD3 311 aaKnown RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 KCTD10Q9H3F6 313 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 RNPEPQ9H4A4 650 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 SCUBE2Q9NQ36 999 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 PRMT7Q9NVM4 692 aaPredicted RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 ARHGAP28Q9P2N2 729 aa11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 LIMA1Q9UHB6 759 aaKnown RBP11.12□□□□□ -0.63
FOXCUT-201ENST00000628509 LRRC10BA6NIK2 292 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 HAS3O00219 553 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 HNRNPDLO14979 420 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 EXOC3O60645 756 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 N4BP1O75113 896 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 PPP1R37O75864 691 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 C22orf31O95567 290 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 NR3C1P04150 777 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 SMIM10L2AP0DMW4 78 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 SMIM10L2BP0DMW5 78 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 ELNP15502 786 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 ZNF75DP51815 510 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 IGBP1P78318 339 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 PURAQ00577 322 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 TSR1Q2NL82 804 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 GJC2Q5T442 439 aaPredicted RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 INTS8Q75QN2 995 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 SRGAP1Q7Z6B7 1085 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 RHPN2Q8IUC4 686 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 TMEM161BQ8NDZ6 487 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 PRPF31Q8WWY3 499 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 VTI1AQ96AJ9 217 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 TMEM143Q96AN5 459 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 CNOT6LQ96LI5 555 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 TUBGCP2Q9BSJ2 902 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 NOC4LQ9BVI4 516 aaKnown RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 NUP58Q9BVL2 599 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 GCOM2Q9BZD3 368 aaPredicted RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 XPNPEP1Q9NQW7 623 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 IFNKQ9P0W0 207 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 ARMCX3Q9UH62 379 aaPredicted RBP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 NOD1Q9Y239 953 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 PTPN22Q9Y2R2 807 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 DAAM1Q9Y4D1 1078 aa11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.11□□□□□ -0.63
FOXCUT-201ENST00000628509 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 MAP3K13O43283 966 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 CAND2O75155 1236 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 ERLIN2O94905 339 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 CYP2C9P11712 490 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 GLRA2P23416 452 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 MATR3P43243 847 aaKnown RBP eCLIP11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 HTRA3P83110 453 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 LAMTOR4Q0VGL1 99 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 SURF1Q15526 300 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 ZCWPW2Q504Y3 356 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 HS1BP3Q53T59 392 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 CEP135Q66GS9 1140 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms