RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 PIN4Q9Y237 131 aaKnown RBP13.52□□□□□ -0.25
UBR1-212ENST00000627960 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 ZNF623O75123 536 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 COL9A1P20849 921 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 PPM1AP35813 382 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 NDUFV1P49821 464 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 KRT17Q04695 432 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 ZP2Q05996 745 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 SMAD4Q13485 552 aaKnown RBP13.51□□□□□ -0.25
UBR1-212ENST00000627960 SMAD2Q15796 467 aaKnown RBP13.51□□□□□ -0.25
UBR1-212ENST00000627960 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 LPPQ93052 612 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 MTRQ99707 1265 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 MRPL9Q9BYD2 267 aaKnown RBP13.51□□□□□ -0.25
UBR1-212ENST00000627960 TMEM60Q9H2L4 133 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 MINDY3Q9H8M7 445 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 FAM105AQ9NUU6 356 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 SPG21Q9NZD8 308 aa13.51□□□□□ -0.25
UBR1-212ENST00000627960 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 PER2O15055 1255 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 EYA4O95677 639 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 GLP2RO95838 553 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 PBX3P40426 434 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 RAB27AP51159 221 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 COASYQ13057 564 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 DUSP6Q16828 381 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 ADHFE1Q8IWW8 467 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 SLC39A11Q8N1S5 342 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 RNF149Q8NC42 400 aa13.5□□□□□ -0.25
UBR1-212ENST00000627960 CDCA3Q99618 268 aaPredicted RBP13.5□□□□□ -0.25
UBR1-212ENST00000627960 FOXP1Q9H334 677 aaPredicted RBP13.5□□□□□ -0.25
UBR1-212ENST00000627960 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 MEIS3P2A8K0S8 358 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 OFD1O75665 1012 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 DGAT1O75907 488 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 XRCC6P12956 609 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBR1-212ENST00000627960 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
UBR1-212ENST00000627960 MCM7P33993 719 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 BCAR1P56945 870 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
UBR1-212ENST00000627960 MXD4Q14582 209 aaPredicted RBP13.49□□□□□ -0.25
UBR1-212ENST00000627960 LONRF3Q496Y0 759 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 NOMO2Q5JPE7 1267 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 GLB1LQ6UWU2 654 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 MRPL10Q7Z7H8 261 aaKnown RBP13.49□□□□□ -0.25
UBR1-212ENST00000627960 FBXO18Q8NFZ0 1043 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 PGBD4Q96DM1 585 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 TCF25Q9BQ70 676 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 NGRNQ9NPE2 291 aaKnown RBP13.49□□□□□ -0.25
UBR1-212ENST00000627960 ENTPD7Q9NQZ7 604 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
UBR1-212ENST00000627960 BARX2Q9UMQ3 279 aaPredicted RBP13.49□□□□□ -0.25
UBR1-212ENST00000627960 PCDHB2Q9Y5E7 798 aa13.49□□□□□ -0.25
UBR1-212ENST00000627960 C5orf42Q9H799 3197 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 A0A087WWV3 80 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 POTEMA6NI47 508 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 HIDE1A8MVS5 230 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 NT5C1B-RDH14C9J2C7 533 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 GPR37L1O60883 481 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 SPATA31C1P0DKV0 1188 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 ARL2P36404 184 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 ALDH7A1P49419 539 aaKnown RBP13.48□□□□□ -0.25
UBR1-212ENST00000627960 RBM25P49756 843 aaKnown RBP13.48□□□□□ -0.25
UBR1-212ENST00000627960 RARRES1P49788 294 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 PTENP60484 403 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 RBM10P98175 930 aaKnown RBP13.48□□□□□ -0.25
UBR1-212ENST00000627960 POU5F1BQ06416 359 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 ORC2Q13416 577 aaPredicted RBP13.48□□□□□ -0.25
UBR1-212ENST00000627960 TFDP1Q14186 410 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 PCBP1Q15365 356 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBR1-212ENST00000627960 ZNF174Q15697 407 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 TMEM31Q5JXX7 168 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 UBXN11Q5T124 520 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 TMEM184AQ6ZMB5 413 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 AGMOQ6ZNB7 445 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 TMC7Q7Z402 723 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
UBR1-212ENST00000627960 FAM184AQ8NB25 1140 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 VN1R2Q8NFZ6 395 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 ASAP3Q8TDY4 903 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 LRFN3Q9BTN0 628 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 TUFT1Q9NNX1 390 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
UBR1-212ENST00000627960 CARNS1A5YM72 827 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 ALADP13716 330 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 TECP42680 631 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 CAPSQ13938 189 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 KCNC3Q14003 757 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 SMRP1Q8NCR6 262 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 CCDC43Q96MW1 224 aaKnown RBP13.47□□□□□ -0.25
UBR1-212ENST00000627960 POP1Q99575 1024 aaKnown RBP13.47□□□□□ -0.25
UBR1-212ENST00000627960 POLR3CQ9BUI4 534 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms