RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 CNBD1Q8NA66 436 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 MDM1Q8TC05 714 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 RNF217Q8TC41 542 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NEK9Q8TD19 979 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NSUN4Q96CB9 384 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 KLHL29Q96CT2 875 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NAF1Q96HR8 494 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 RAB3IPQ96QF0 476 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PLIN2Q99541 437 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 SPZ1Q9BXG8 430 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PACSIN1Q9BY11 444 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 RAB34Q9BZG1 259 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 TANGO6Q9C0B7 1094 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 CARD9Q9H257 536 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ECT2Q9H8V3 914 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 KIF9Q9HAQ2 790 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 RXFP1Q9HBX9 757 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ZFATQ9P243 1243 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ARPP21Q9UBL0 812 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 AMACRQ9UHK6 382 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 MAD2L2Q9UI95 211 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 RASAL2Q9UJF2 1139 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NAGPAQ9UK23 515 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PACSIN2Q9UNF0 486 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 AGAP1Q9UPQ3 857 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ARL2BPQ9Y2Y0 163 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 WDR81Q562E7 1941 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 DICER1Q9UPY3 1922 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NCANO14594 1321 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 USP17L12C9JPN9 530 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 USP17L21D6R901 530 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TRAF5O00463 557 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 DDX3YO15523 660 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 EYA4O95677 639 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 BAG3O95817 575 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ALAS1P13196 640 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 RARGP13631 454 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 GYS1P13807 737 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 GNAZP19086 355 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 OSBPP22059 807 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CNGA1P29973 690 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP5DP30049 168 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 HIBADHP31937 336 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 RFC4P35249 363 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TECP42680 631 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 GCLCP48506 637 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 HADHBP55084 474 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 RNASE9P60153 205 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ROR2Q01974 943 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 BIRC2Q13490 618 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 RAPGEF1Q13905 1077 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PLS1Q14651 629 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TCEAL1Q15170 157 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 DIXDC1Q155Q3 683 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PDCD2Q16342 344 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 SLC5A9Q2M3M2 681 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ZNF568Q3ZCX4 644 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 GRIPAP1Q4V328 841 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ANKRD20A2Q5SQ80 823 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TRAPPC3LQ5T215 181 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ANKRD20A1Q5TYW2 823 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ANKRD20A3Q5VUR7 823 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 SPTY2D1Q68D10 685 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 DENND2CQ68D51 928 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ZNF571Q7Z3V5 609 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 VPS36Q86VN1 386 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 FAM133AQ8N9E0 248 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 RASGRP4Q8TDF6 673 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 DNAJC19Q96DA6 116 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 FAM210AQ96ND0 272 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TMEM237Q96Q45 408 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CRAMP1Q96RY5 1269 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 C6orf50Q9HD87 102 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ABCF3Q9NUQ8 709 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 MTRF1LQ9UGC7 380 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PCYOX1Q9UHG3 505 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP8A1Q9Y2Q0 1164 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PLIN4Q96Q06 1357 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 GPR75-ASB3A0A0A6YYF3 556 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 FRMD3A2A2Y4 597 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 GTPBP10A4D1E9 387 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 EME2A4GXA9 379 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TSPY2A6NKD2 308 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 IGF2BP3O00425 579 aaKnown RBP eCLIP4.5□□□□□ -1.698e-7■■■■■ 27.1
PTP4A1-205ENST00000626021 BACH1O14867 736 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 KIAA0391O15091 583 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CETN3O15182 167 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 LMNAP02545 664 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 TMEM253P0C7T8 217 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 ITGA4P13612 1032 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CALB2P22676 271 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 CHRNA3P32297 505 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 PTGIRP43119 386 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 SSR1P43307 286 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 RAB27AP51159 221 aa4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 DYNLL1P63167 89 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-205ENST00000626021 KCNJ2P63252 427 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms