RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PDXDC2PQ6P474 469 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 AGO4Q9HCK5 861 aaKnown RBP15.8■□□□□ 0.12
SNX1-214ENST00000625244 LTB4R2Q9NPC1 389 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 PRMT8Q9NR22 394 aaPredicted RBP15.8■□□□□ 0.12
SNX1-214ENST00000625244 MRPL17Q9NRX2 175 aaKnown RBP15.8■□□□□ 0.12
SNX1-214ENST00000625244 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 AKT3Q9Y243 479 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 INPP5FQ9Y2H2 1132 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 LOC400499M0QZD8 3231 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 CARNS1A5YM72 827 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 SPDYE3A6NKU9 549 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 DDX39AO00148 427 aaKnown RBP15.79■□□□□ 0.12
SNX1-214ENST00000625244 TEX28O15482 410 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 SPATA31D3P0C874 917 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 SDSP20132 328 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 PHKA2P46019 1235 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 PRKCQQ04759 706 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 RNASELQ05823 741 aaKnown RBP15.79■□□□□ 0.12
SNX1-214ENST00000625244 NOMO2Q5JPE7 1267 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 PARM1Q6UWI2 310 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 SPATA31D4Q6ZUB0 917 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 TRMT1LQ7Z2T5 733 aaKnown RBP15.79■□□□□ 0.12
SNX1-214ENST00000625244 ZNF280BQ86YH2 543 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 RILPL2Q969X0 211 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 CLDN23Q96B33 292 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 RRP36Q96EU6 259 aaKnown RBP15.79■□□□□ 0.12
SNX1-214ENST00000625244 ZNF302Q9NR11 478 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 SEMA4GQ9NTN9 838 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 DACT1Q9NYF0 836 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 PCDHB15Q9Y5E8 787 aa15.79■□□□□ 0.12
SNX1-214ENST00000625244 CSDE1O75534 798 aaKnown RBP15.78■□□□□ 0.12
SNX1-214ENST00000625244 PAPLNO95428 1278 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 GLUD1P00367 558 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 DARSP14868 501 aaKnown RBP15.78■□□□□ 0.12
SNX1-214ENST00000625244 MAGEA9P43362 315 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 AK2P54819 239 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 LAIR1Q6GTX8 287 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 SWSAP1Q6NVH7 229 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 PRR23CQ6ZRP0 262 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 LRRC71Q8N4P6 559 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 LINC01465Q8N7H1 131 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 SPZ1Q9BXG8 430 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 NT5C3AQ9H0P0 336 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 PIDD1Q9HB75 910 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 RAB23Q9ULC3 237 aa15.78■□□□□ 0.12
SNX1-214ENST00000625244 ITPR1Q14643 2758 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 IFIT3O14879 490 aaKnown RBP15.77■□□□□ 0.12
SNX1-214ENST00000625244 LRP3O75074 770 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 OFD1O75665 1012 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 ADH1AP07327 375 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 RETP07949 1114 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 TDGF1P13385 188 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 TARSP26639 723 aaKnown RBP15.77■□□□□ 0.12
SNX1-214ENST00000625244 GPC3P51654 580 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 ZBTB41Q5SVQ8 909 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 ANKRD45Q5TZF3 282 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 EFCAB12Q6NXP0 572 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 GLB1LQ6UWU2 654 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 CWC27Q6UX04 472 aaKnown RBP15.77■□□□□ 0.12
SNX1-214ENST00000625244 TAS1R1Q7RTX1 841 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 CKAP2LQ8IYA6 745 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 RPS6KC1Q96S38 1066 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 MAP7D2Q96T17 732 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 DSCC1Q9BVC3 393 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 FAM126AQ9BYI3 521 aaPredicted RBP15.77■□□□□ 0.12
SNX1-214ENST00000625244 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.12
SNX1-214ENST00000625244 ZMIZ1Q9ULJ6 1067 aa15.77■□□□□ 0.12
SNX1-214ENST00000625244 AKAP13Q12802 2813 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 DDHD2O94830 711 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 KIF5BP33176 963 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 MTAPQ13126 283 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 FZD5Q13467 585 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 CSRP2Q16527 193 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 ELMSAN1Q6PJG2 1045 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 CELF5Q8N6W0 485 aaKnown RBP15.76■□□□□ 0.11
SNX1-214ENST00000625244 RSPH1Q8WYR4 309 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 DDX1Q92499 740 aaKnown RBP15.76■□□□□ 0.11
SNX1-214ENST00000625244 PHKBQ93100 1093 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 MYL10Q9BUA6 226 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 STK39Q9UEW8 545 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 DPP7Q9UHL4 492 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 RCAN3Q9UKA8 241 aa15.76■□□□□ 0.11
SNX1-214ENST00000625244 MYH15Q9Y2K3 1946 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 C1QTNF9BB2RNN3 333 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 MAGEB2O15479 319 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 SOD2P04179 222 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 URODP06132 367 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 C1QTNF9P0C862 333 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 RPS9P46781 194 aaKnown RBP15.75■□□□□ 0.11
SNX1-214ENST00000625244 AFF1P51825 1210 aaKnown RBP15.75■□□□□ 0.11
SNX1-214ENST00000625244 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 RSPO2Q6UXX9 243 aaPredicted RBP15.75■□□□□ 0.11
SNX1-214ENST00000625244 PRR23BQ6ZRT6 265 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 PGBD1Q96JS3 809 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 TRAIPQ9BWF2 469 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 PRKD2Q9BZL6 878 aa15.75■□□□□ 0.11
SNX1-214ENST00000625244 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
SNX1-214ENST00000625244 MAFBQ9Y5Q3 323 aaPredicted RBP15.75■□□□□ 0.11
SNX1-214ENST00000625244 MEIS1O00470 390 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms