RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 VPS11Q9H270 941 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 PPP4R2Q9NY27 417 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 AGO2Q9UKV8 859 aaKnown RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 LRCH1Q9Y2L9 728 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 TMED5Q9Y3A6 229 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 SPEF1Q9Y4P9 236 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 SNX8Q9Y5X2 465 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 NWD2Q9ULI1 1742 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 SLIT3O75094 1523 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 PARD3Q8TEW0 1356 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 G3V3G9 751 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 STARD3NLO95772 234 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 S100A6P06703 90 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 L1CAMP32004 1257 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 SOX6P35712 828 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 CRKP46108 304 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 RPS6KA3P51812 740 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 MBTPS1Q14703 1052 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 C15orf59Q2T9L4 293 aaPredicted RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 CCDC38Q502W7 563 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 CEP55Q53EZ4 464 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 FAM26DQ5JW98 314 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 MRM1Q6IN84 353 aaKnown RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 IKBIPQ70UQ0 350 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 DEPTORQ8TB45 409 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 UNKQ9C0B0 810 aaKnown RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 SPON1Q9HCB6 807 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 POLMQ9NP87 494 aaPredicted RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 POLIQ9UNA4 740 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 NUDCQ9Y266 331 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
CDKL5-206ENST00000623610 MAP4K5Q9Y4K4 846 aa9.37□□□□□ -0.91
CDKL5-206ENST00000623610 GAKO14976 1311 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 NRAPQ86VF7 1730 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 A0A0G2JS52 829 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 TXNL1O43396 289 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 SLC22A3O75751 556 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 LLGL1Q15334 1064 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 FOXB2Q5VYV0 432 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 CORO6Q6QEF8 472 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 GJD3Q8N144 294 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 C7orf57Q8NEG2 295 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 GIMAP5Q96F15 307 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 FAM193BQ96PV7 902 aaPredicted RBP9.36□□□□□ -0.91
CDKL5-206ENST00000623610 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
CDKL5-206ENST00000623610 NSRP1Q9H0G5 558 aaKnown RBP9.36□□□□□ -0.91
CDKL5-206ENST00000623610 OLA1Q9NTK5 396 aaKnown RBP9.36□□□□□ -0.91
CDKL5-206ENST00000623610 COLQQ9Y215 455 aaPredicted RBP9.36□□□□□ -0.91
CDKL5-206ENST00000623610 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PI4K2BG5E9Z4 385 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 RNF113AO15541 343 aaKnown RBP9.35□□□□□ -0.91
CDKL5-206ENST00000623610 ADCY3O60266 1144 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PSMA4P25789 261 aaKnown RBP9.35□□□□□ -0.91
CDKL5-206ENST00000623610 SLC26A5P58743 744 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 KRT32Q14532 448 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PCBP2Q15366 365 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDKL5-206ENST00000623610 TAF5Q15542 800 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 RGS9BPQ6ZS82 235 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 RUSC1Q9BVN2 902 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 SEPT11Q9NVA2 429 aaKnown RBP9.35□□□□□ -0.91
CDKL5-206ENST00000623610 AP1M2Q9Y6Q5 423 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 CPDO75976 1380 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 CAMTA1Q9Y6Y1 1673 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 FZD9O00144 591 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PQBP1O60828 265 aaKnown RBP9.35□□□□□ -0.91
CDKL5-206ENST00000623610 CKMT1AP12532 417 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PPM1AP35813 382 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 TNFAIP2Q03169 654 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 EVX2Q03828 476 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 CTC1Q2NKJ3 1217 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PKDCCQ504Y2 493 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 C11orf88Q6PI97 169 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PPFIBP1Q86W92 1011 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 GALNT12Q8IXK2 581 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 ANKRD53Q8N9V6 530 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 SPC24Q8NBT2 197 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 DIS3LQ8TF46 1054 aaKnown RBP9.35□□□□□ -0.91
CDKL5-206ENST00000623610 CCDC106Q9BWC9 280 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 SYNCQ9H7C4 482 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 LRRC4BQ9NT99 713 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 FLT1P17948 1338 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 GLI3P10071 1580 aa9.35□□□□□ -0.91
CDKL5-206ENST00000623610 PGPEP1LA6NFU8 196 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 ERLIN1O75477 346 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 DDAH1O94760 285 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 KCNH1O95259 989 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 LTFP02788 710 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 FBLN1P23142 703 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 CUL2Q13617 745 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 TAF12Q16514 161 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 ZNF674Q2M3X9 581 aa9.34□□□□□ -0.91
CDKL5-206ENST00000623610 ASTLQ6HA08 431 aaPredicted RBP9.34□□□□□ -0.91
CDKL5-206ENST00000623610 B3GNT9Q6UX72 402 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms