RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TMPRSS11EQ9UL52 423 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 SYNPO2Q9UMS6 1093 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 USP18Q9UMW8 372 aa6.32□□□□□ -1.4
BRCA1-229ENST00000621897 ST20-MTHFSA0A0A6YYL1 179 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 KDM1AO60341 852 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 C1SP09871 688 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 CLEC2LP0C7M8 214 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 KIR2DL3P43628 341 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 CD69Q07108 199 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 DDB1Q16531 1140 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 MIIPQ5JXC2 388 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 SDE2Q6IQ49 451 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 FAM111BQ6SJ93 734 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 STRA8Q7Z7C7 330 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 C1orf210Q8IVY1 113 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 CDYL2Q8N8U2 506 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 SLC16A11Q8NCK7 471 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 ZNF503Q96F45 646 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 MPHOSPH9Q99550 1183 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 TCF25Q9BQ70 676 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 ANO3Q9BYT9 981 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 C14orf93Q9H972 538 aaKnown RBP6.31□□□□□ -1.4
BRCA1-229ENST00000621897 ING3Q9NXR8 418 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 NCDNQ9UBB6 729 aa6.31□□□□□ -1.4
BRCA1-229ENST00000621897 NEMP1O14524 444 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 MAFGO15525 162 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 STC2O76061 302 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 SEC24DO94855 1032 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-229ENST00000621897 FSBPO95073 299 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 JUNP05412 331 aaKnown RBP6.3□□□□□ -1.4
BRCA1-229ENST00000621897 HHEXQ03014 270 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 ATP13A4Q4VNC1 1196 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 Q6ZRM9 215 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 C11orf74Q86VG3 221 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 LYSMD2Q8IV50 215 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 USP7Q93009 1102 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 UIMC1Q96RL1 719 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 RCAN3Q9UKA8 241 aa6.3□□□□□ -1.4
BRCA1-229ENST00000621897 NPIPB8E9PQR5 432 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 LY86O95711 162 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 HSD3B2P26439 372 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 ACVRL1P37023 503 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 TRIM25Q14258 630 aaKnown RBP6.29□□□□□ -1.4
BRCA1-229ENST00000621897 PDCD1Q15116 288 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 DHCR24Q15392 516 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 ELAVL1Q15717 326 aaKnown RBP6.29□□□□□ -1.4
BRCA1-229ENST00000621897 MAN2A1Q16706 1144 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 FRMD7Q6ZUT3 714 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 SLC41A1Q8IVJ1 513 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 CMTM4Q8IZR5 234 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 GAB3Q8WWW8 586 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 ZNF341Q9BYN7 854 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
BRCA1-229ENST00000621897 GIT1Q9Y2X7 761 aa6.29□□□□□ -1.4
BRCA1-229ENST00000621897 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 MTSS1O43312 755 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 CFBP00751 764 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 SCNN1GP51170 649 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 PTH1RQ03431 593 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 PPARAQ07869 468 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 STRN3Q13033 797 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 RRP1BQ14684 758 aaKnown RBP6.28□□□□□ -1.4
BRCA1-229ENST00000621897 FKBP15Q5T1M5 1219 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 CCDC62Q6P9F0 684 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 RASSF3Q86WH2 238 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 UNC5BQ8IZJ1 945 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 CACTINQ8WUQ7 758 aaKnown RBP6.28□□□□□ -1.4
BRCA1-229ENST00000621897 PLEKHG4BQ96PX9 1271 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 EVLQ9UI08 416 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-229ENST00000621897 HS3ST3A1Q9Y663 406 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 NUMBLQ9Y6R0 609 aa6.28□□□□□ -1.4
BRCA1-229ENST00000621897 RAB11FIP3O75154 756 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 ALDH1A2O94788 518 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 SLPIP03973 132 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 CRHR2Q13324 411 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 SPIDRQ14159 915 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 CT83Q5H943 113 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 DDX46Q7L014 1031 aaKnown RBP6.27□□□□□ -1.41
BRCA1-229ENST00000621897 ZFPM1Q8IX07 1006 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 ELOA2Q8IYF1 753 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-229ENST00000621897 ANKRD35Q8N283 1001 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 MSL3Q8N5Y2 521 aaKnown RBP6.27□□□□□ -1.41
BRCA1-229ENST00000621897 CLRN3Q8NCR9 226 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 MIEF2Q96C03 454 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 ENKD1Q9H0I2 346 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 CSRNP2Q9H175 543 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 IFT22Q9H7X7 185 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 TOPORSQ9NS56 1045 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-229ENST00000621897 CEP72Q9P209 647 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 PRSS50Q9UI38 385 aa6.27□□□□□ -1.41
BRCA1-229ENST00000621897 NOC2LQ9Y3T9 749 aaKnown RBP6.27□□□□□ -1.41
BRCA1-229ENST00000621897 A0A1W2PR48 441 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 FZD7O75084 574 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 LPLP06858 475 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 GDF5P43026 501 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 MASP1P48740 699 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 GPR15P49685 360 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 RABGGTBP53611 331 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 MGAT5Q09328 741 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms