RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 UTP14CQ5TAP6 766 aaKnown RBP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 MTHFD1LQ6UB35 978 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 TPRG1Q6ZUI0 275 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 PIP4P1Q86T03 277 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 NLRX1Q86UT6 975 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 C11orf74Q86VG3 221 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 DGKHQ86XP1 1220 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 MAP4K3Q8IVH8 894 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 TRMT2AQ8IZ69 625 aaKnown RBP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 CHCHD4Q8N4Q1 142 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 FEZF2Q8TBJ5 459 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 ADAMTS14Q8WXS8 1223 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 AUTS2Q8WXX7 1259 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 ELSPBP1Q96BH3 223 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 CDHR1Q96JP9 859 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 MBOAT7Q96N66 472 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 TMEM175Q9BSA9 504 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 PI4K2AQ9BTU6 479 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 MKNK1Q9BUB5 465 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 PHF20Q9BVI0 1012 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 AMNQ9BXJ7 453 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 FAM49AQ9H0Q0 323 aaPredicted RBP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 DUSP15Q9H1R2 295 aaPredicted RBP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 NRDE2Q9H7Z3 1164 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 CDHR5Q9HBB8 845 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 AVENQ9NQS1 362 aaPredicted RBP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 MAN1C1Q9NR34 630 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 HEBP1Q9NRV9 189 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 CHST7Q9NS84 486 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 DACT1Q9NYF0 836 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 FNIP2Q9P278 1114 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 HCSTQ9UBK5 93 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 ANAPC4Q9UJX5 808 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 SALL2Q9Y467 1007 aaPredicted RBP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 PCDHB15Q9Y5E8 787 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 TRIP12Q14669 1992 aaPredicted RBP2.74□□□□□ -1.97
CPNE3-211ENST00000621526 MYH13Q9UKX3 1938 aa2.74□□□□□ -1.97
CPNE3-211ENST00000621526 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 UBR5O95071 2799 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 RALGAPA2Q2PPJ7 1873 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CCDC171Q6TFL3 1326 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SALL3Q9BXA9 1300 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 AKAP13Q12802 2813 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TEX51A0A1B0GUA7 166 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 B8ZZF3 427 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 GCOM1H8Y6P7 765 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 OPLAHO14841 1288 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 MEFVO15553 781 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TGM5O43548 720 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF862O60290 1169 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 HBP1O60381 514 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 NMT2O60551 498 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 RAB11FIP3O75154 756 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 XYLBO75191 536 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 GPR32O75388 356 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 OFD1O75665 1012 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 RFPL2O75678 378 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 ATG7O95352 703 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 PRB1P04280 392 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 IFIT2P09913 472 aaKnown RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 POLR2MP0CAP2 368 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CHRM1P11229 460 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 PCP11498 1178 aaKnown RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 EIF4BP23588 611 aaKnown RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CA8P35219 290 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 PBX3P40426 434 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 DPP6P42658 865 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TDO2P48775 406 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CSRP3P50461 194 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 STAT5BP51692 787 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SIM1P81133 766 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 MRPS9P82933 396 aaKnown RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 DSG1Q02413 1049 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CREMQ03060 361 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CFHR1Q03591 330 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 PPARAQ07869 468 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SLFN5Q08AF3 891 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TMEM62Q0P6H9 643 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SRSF5Q13243 272 aaKnown RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SLC14A1Q13336 389 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 ELF2Q15723 593 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TMEM266Q2M3C6 531 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 USH1GQ495M9 461 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SLFNL1Q499Z3 407 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CCDC178Q5BJE1 867 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF484Q5JVG2 852 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 CLLU1OSQ5K130 101 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 SPDYCQ5MJ68 293 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 KRT25Q7Z3Z0 450 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 KBTBD6Q86V97 674 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TMEM173Q86WV6 379 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 RNF168Q8IYW5 571 aaPredicted RBP2.73□□□□□ -1.97
CPNE3-211ENST00000621526 ADGRF4Q8IZF3 695 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 STK11IPQ8N1F8 1099 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 DEFB124Q8NES8 71 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 RHPN1Q8TCX5 695 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 TMEM40Q8WWA1 233 aa2.73□□□□□ -1.97
CPNE3-211ENST00000621526 APPBP2Q92624 585 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms