RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 FANCBQ8NB91 859 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 CATSPER1Q8NEC5 780 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 HEMGNQ9BXL5 484 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 STK17AQ9UEE5 414 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TTC7AQ9ULT0 858 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-210ENST00000621266 LEMD3Q9Y2U8 911 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SUGT1Q9Y2Z0 365 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 TNKSO95271 1327 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SPATA31A3Q5VYP0 1347 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 NFIBO00712 420 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SLC9A5Q14940 896 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 ADCK5Q3MIX3 580 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 SIKE1Q9BRV8 207 aa10.53□□□□□ -0.72
COL4A6-210ENST00000621266 ZBED1O96006 694 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 PHKA1P46020 1223 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 ODR4Q5SWX8 454 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 TMC5Q6UXY8 1006 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 TMC4Q7Z404 712 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 SH2D3CQ8N5H7 860 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 CCNYL1Q8N7R7 359 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 CCT7Q99832 543 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 SLC40A1Q9NP59 571 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 UBN2Q6ZU65 1347 aa10.52□□□□□ -0.72
COL4A6-210ENST00000621266 F5H423 210 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 PCP11498 1178 aaKnown RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 ATP6V1B1P15313 513 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 IL10P22301 178 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 ICA1Q05084 483 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 TRIM25Q14258 630 aaKnown RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 TRMT2AQ8IZ69 625 aaKnown RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 FGAP02671 866 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 GYS1P13807 737 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 PNMA1Q8ND90 353 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 POLD4Q9HCU8 107 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 STAP2Q9UGK3 403 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 ABCC3O15438 1527 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 CARMIL3Q8ND23 1372 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 LRRIQ4A6NIV6 560 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 PMLP29590 882 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 DEFA1P59665 94 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 DEFA3P59666 94 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 CCNA1P78396 465 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 WASHC5Q12768 1159 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 LRRC8BQ6P9F7 803 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 KCTD1Q719H9 257 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 KIRREL3Q8IZU9 778 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 LARP4BQ92615 738 aaKnown RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 CNBD2Q96M20 576 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 PUS3Q9BZE2 481 aaKnown RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 CCND1P24385 295 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 MDH1P40925 334 aaKnown RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 ARL4CP56559 192 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 HORMAD1Q86X24 394 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF555Q8NEP9 628 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 ZC3H15Q8WU90 426 aaKnown RBP10.52□□□□□ -0.73
COL4A6-210ENST00000621266 FAM149B1Q96BN6 582 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 TUBGCP3Q96CW5 907 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 NDEL1Q9GZM8 345 aa10.52□□□□□ -0.73
COL4A6-210ENST00000621266 KPNA7A9QM74 516 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ARL4AP40617 200 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ZBTB8OSQ8IWT0 167 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 MARCH10Q8NA82 808 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-210ENST00000621266 TEX12Q9BXU0 123 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 THAP9Q9H5L6 903 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 SUGCTQ9HAC7 445 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 MRPL47Q9HD33 250 aaKnown RBP10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ADAMTS1Q9UHI8 967 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 CDK12Q9NYV4 1490 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-210ENST00000621266 CCDC188H7C350 402 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF507Q8TCN5 953 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 SEPT3Q9UH03 358 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 AKAP10O43572 662 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ECE2O60344 883 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 SASH1O94885 1247 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 LUZP2Q86TE4 346 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 DDHD1Q8NEL9 900 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 LZICQ8WZA0 190 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 CCT8L2Q96SF2 557 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 PARVGQ9HBI0 331 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 GFPT1Q06210 699 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-210ENST00000621266 POLA2Q14181 598 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 CDO1Q16878 200 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 KCNG1Q9UIX4 513 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 FBXL5Q9UKA1 691 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ATP10DQ9P241 1426 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 DDAH1O94760 285 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 RHOBTB1O94844 696 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ZNF211Q13398 564 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-210ENST00000621266 ANGPT1Q15389 498 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 FRA10AC1Q70Z53 315 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 RASGRP4Q8TDF6 673 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 HIC2Q96JB3 615 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 NPHS2Q9NP85 383 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 MED23Q9ULK4 1368 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 CEP152O94986 1710 aa10.51□□□□□ -0.73
COL4A6-210ENST00000621266 TMEM247A6NEH6 219 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ERVV-1B6SEH8 477 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms