RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 SAMM50Q9Y512 469 aa13.66□□□□□ -0.22
TNFAIP3-211ENST00000621150 ZMYM2Q9UBW7 1377 aa13.66□□□□□ -0.22
TNFAIP3-211ENST00000621150 PGK1P00558 417 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 SKILP12757 684 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 UBA1P22314 1058 aaKnown RBP13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 RTP1P59025 263 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 NFIL3Q16649 462 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 ZNF720Q7Z2F6 126 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 C17orf53Q8N3J3 647 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 LENG1Q96BZ8 264 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 EEF2KMTQ96G04 330 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 TSG101Q99816 390 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 POLD4Q9HCU8 107 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 WDR81Q562E7 1941 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 UBE4BO95155 1302 aa13.65□□□□□ -0.22
TNFAIP3-211ENST00000621150 TMEM150BA6NC51 233 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 SFI1A8K8P3 1242 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 PDXKO00764 312 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 BACH1O14867 736 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 HIP1RO75146 1068 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 FAM13AO94988 1023 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 GYPCP04921 128 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 PSAPP07602 524 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 SUPT20HL2P0C7V6 817 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 TGFB3P10600 412 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 MAPTP10636 758 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 SNX17Q15036 470 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 RNF180Q86T96 592 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 MAGEC2Q9UBF1 373 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 GABBR1Q9UBS5 961 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 TGFB1I1O43294 461 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ATP9BO43861 1147 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ADAMTS4O75173 837 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 PRPF6O94906 941 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ATP4AP20648 1035 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 NMT1P30419 496 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 DNM2P50570 870 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 GOLGA8FQ08AF8 430 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 GOLGA8DPQ0D2H9 430 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 TDHQ8IZJ6 230 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ATP6V0A1Q93050 837 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ERGIC2Q96RQ1 377 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 TTYH3Q9C0H2 523 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ST6GALNAC4Q9H4F1 302 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 OCEL1Q9H607 264 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 MRPL44Q9H9J2 332 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 TYW1Q9NV66 732 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 ZHX1Q9UKY1 873 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 FAM184BQ9ULE4 1060 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 PHF24Q9UPV7 400 aa13.64□□□□□ -0.23
TNFAIP3-211ENST00000621150 DOCK5Q9H7D0 1870 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 B4DLN1 442 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 MFAP3LO75121 409 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 ARIH2O95376 493 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 NPEPPSP55786 919 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 RBL2Q08999 1139 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 MAN2A1Q16706 1144 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 TRIM60Q495X7 471 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 C1orf53Q5VUE5 145 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 SWSAP1Q6NVH7 229 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 CCDC62Q6P9F0 684 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 SEPT14Q6ZU15 432 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 CCDC112Q8NEF3 446 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 TMEM174Q8WUU8 243 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 PANX2Q96RD6 677 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 CEP89Q96ST8 783 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 PCYT2Q99447 389 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 ABHD16BQ9H3Z7 469 aa13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-211ENST00000621150 RCCD1A6NED2 376 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 SOWAHDA6NJG2 315 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 ADCY6O43306 1168 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 GCNT3O95395 438 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 GNA14O95837 355 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 UBXN1Q04323 297 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 TRIM14Q14142 442 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 NEDD9Q14511 834 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 VWA3BQ502W6 1294 aa13.62□□□□□ -0.23
TNFAIP3-211ENST00000621150 UTP14CQ5TAP6 766 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms