RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 UBE3AQ05086 875 aa32.26■■■□□ 2.75
SEMA3B-215ENST00000621029 GADD45GIP1Q8TAE8 222 aaPredicted RBP32.26■■■□□ 2.75
SEMA3B-215ENST00000621029 TRAIPQ9BWF2 469 aa32.26■■■□□ 2.75
SEMA3B-215ENST00000621029 MRPL9Q9BYD2 267 aaKnown RBP32.26■■■□□ 2.75
SEMA3B-215ENST00000621029 PUF60Q9UHX1 559 aaKnown RBP32.26■■■□□ 2.75
SEMA3B-215ENST00000621029 BRWD1Q9NSI6 2320 aa32.26■■■□□ 2.75
SEMA3B-215ENST00000621029 KIAA1671Q9BY89 1806 aa32.26■■■□□ 2.75
SEMA3B-215ENST00000621029 FNDC1Q4ZHG4 1894 aaPredicted RBP32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 MED24O75448 989 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 CD2BP2O95400 341 aaKnown RBP32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 GTF2F1P35269 517 aaKnown RBP eCLIP32.25■■■□□ 2.754e-8■□□□□ 9.5
SEMA3B-215ENST00000621029 PBX3P40426 434 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 MCM2P49736 904 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 KCNT2Q6UVM3 1135 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 MAEAQ7L5Y9 396 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 RBM23Q86U06 439 aaKnown RBP32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 TBC1D32Q96NH3 1257 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 NACC1Q96RE7 527 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 TLR9Q9NR96 1032 aa32.25■■■□□ 2.75
SEMA3B-215ENST00000621029 INO80B-WBP1J3KQ70 363 aa32.24■■■□□ 2.75
SEMA3B-215ENST00000621029 NCBP1Q09161 790 aaKnown RBP32.24■■■□□ 2.75
SEMA3B-215ENST00000621029 GLB1LQ6UWU2 654 aa32.24■■■□□ 2.75
SEMA3B-215ENST00000621029 PGBD4Q96DM1 585 aa32.24■■■□□ 2.75
SEMA3B-215ENST00000621029 POLR3CQ9BUI4 534 aaPredicted RBP32.24■■■□□ 2.75
SEMA3B-215ENST00000621029 INPP5FQ9Y2H2 1132 aa32.24■■■□□ 2.75
SEMA3B-215ENST00000621029 PCDHGC5Q9Y5F6 944 aa32.24■■■□□ 2.75
SEMA3B-215ENST00000621029 H3BQV1 296 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 PPM1AP35813 382 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 NRIP1P48552 1158 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 KRT17Q04695 432 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 PUS10Q3MIT2 529 aaKnown RBP32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 POTEGQ6S5H5 508 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 ADGRD2Q7Z7M1 963 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 ASAP3Q8TDY4 903 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 POLR3FQ9H1D9 316 aaPredicted RBP32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 PCDHB2Q9Y5E7 798 aa32.23■■■□□ 2.75
SEMA3B-215ENST00000621029 GJB2P29033 226 aa32.22■■■□□ 2.75
SEMA3B-215ENST00000621029 COL19A1Q14993 1142 aa32.22■■■□□ 2.75
SEMA3B-215ENST00000621029 CLUL1Q15846 466 aa32.22■■■□□ 2.75
SEMA3B-215ENST00000621029 HAUS3Q68CZ6 603 aa32.22■■■□□ 2.75
SEMA3B-215ENST00000621029 TLE6Q9H808 572 aa32.22■■■□□ 2.75
SEMA3B-215ENST00000621029 SPG21Q9NZD8 308 aa32.22■■■□□ 2.75
SEMA3B-215ENST00000621029 LRWD1Q9UFC0 647 aa32.22■■■□□ 2.75
SEMA3B-215ENST00000621029 LINC01565O15544 149 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 RPA1P27694 616 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 ARL2P36404 184 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 CCT6AP40227 531 aaKnown RBP32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 NDUFV1P49821 464 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 PTENP60484 403 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 RNASELQ05823 741 aaKnown RBP32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 PTGDRQ13258 359 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 CAPSQ13938 189 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 MRPS27Q92552 414 aaKnown RBP32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 DBR1Q9UK59 544 aaKnown RBP32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 SMC3Q9UQE7 1217 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 FAM50BQ9Y247 325 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 PCDHB6Q9Y5E3 794 aa32.21■■■□□ 2.75
SEMA3B-215ENST00000621029 ARHGEF35A5YM69 484 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 ZNF623O75123 536 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 IL9P15248 144 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 ALDH7A1P49419 539 aaKnown RBP32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 TOB1P50616 345 aaPredicted RBP32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 ERVFC1P60507 584 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 CTC1Q2NKJ3 1217 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 NOMO2Q5JPE7 1267 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 RAB34Q9BZG1 259 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 ENTPD7Q9NQZ7 604 aa32.2■■■□□ 2.75
SEMA3B-215ENST00000621029 GRXCR2A6NFK2 248 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 MEIS3P2A8K0S8 358 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 GLRA2P23416 452 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 HOXA11P31270 313 aaPredicted RBP32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 LTBRP36941 435 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 FXR2P51116 673 aaKnown RBP eCLIP32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 PLCB3Q01970 1234 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 C4orf32Q8N8J7 132 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 MCPH1Q8NEM0 835 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 RSPH1Q8WYR4 309 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 GPRC5CQ9NQ84 441 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 LZTS1Q9Y250 596 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 ARID2Q68CP9 1835 aa32.19■■■□□ 2.74
SEMA3B-215ENST00000621029 LRRIQ4A6NIV6 560 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 ZC3H11AO75152 810 aaKnown RBP eCLIP32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 BCAR1P56945 870 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 POU5F1BQ06416 359 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 DLX2Q07687 328 aaPredicted RBP32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 ADAM15Q13444 863 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 PCBP1Q15365 356 aaKnown RBP eCLIP32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 PLPP4Q5VZY2 271 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 PDE12Q6L8Q7 609 aaKnown RBP32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 URGCPQ8TCY9 931 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 TCF25Q9BQ70 676 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 GBP3Q9H0R5 595 aa32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 ZSCAN21Q9Y5A6 473 aaPredicted RBP32.18■■■□□ 2.74
SEMA3B-215ENST00000621029 NT5C1B-RDH14C9J2C7 533 aa32.17■■■□□ 2.74
SEMA3B-215ENST00000621029 PER2O15055 1255 aa32.17■■■□□ 2.74
SEMA3B-215ENST00000621029 TSPAN1O60635 241 aa32.17■■■□□ 2.74
SEMA3B-215ENST00000621029 OFD1O75665 1012 aa32.17■■■□□ 2.74
SEMA3B-215ENST00000621029 AXLP30530 894 aa32.17■■■□□ 2.74
SEMA3B-215ENST00000621029 PADI6Q6TGC4 694 aa32.17■■■□□ 2.74
SEMA3B-215ENST00000621029 EFHBQ8N7U6 833 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms