RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TRIM49CP0CI26 452 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ERFP50548 548 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 CYP2J2P51589 502 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 SLC10A5Q5PT55 438 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ERICH1Q86X53 443 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 CPNE8Q86YQ8 564 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 PROM2Q8N271 834 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 PIGOQ8TEQ8 1089 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ALG3Q92685 438 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 KRT35Q92764 455 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 PWWP2AQ96N64 755 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 FAM118BQ9BPY3 351 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 PAGR1Q9BTK6 254 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 DDX23Q9BUQ8 820 aaKnown RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 EDEM3Q9BZQ6 932 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 KDM4CQ9H3R0 1056 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ACP6Q9NPH0 428 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 DDX60Q8IY21 1712 aaKnown RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 EDIL3O43854 480 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 GH1P01241 217 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 CRYMQ14894 314 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ZCWPW2Q504Y3 356 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 SBK1Q52WX2 424 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ZC2HC1CQ53FD0 456 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 KIAA1755Q5JYT7 1200 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 HP1BP3Q5SSJ5 553 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 SEL1L2Q5TEA6 688 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 EMC10Q5UCC4 262 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 CAPN12Q6ZSI9 719 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 JAMLQ86YT9 394 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 SULF1Q8IWU6 871 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 DAGLBQ8NCG7 672 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ZNF317Q96PQ6 595 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 PPP1R12CQ9BZL4 782 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 RAB17Q9H0T7 212 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 GLT8D2Q9H1C3 349 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 DHX36Q9H2U1 1008 aaKnown RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 PABPC3Q9H361 631 aaKnown RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 FRMD4BQ9Y2L6 1034 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ADAMTS7Q9UKP4 1686 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 TCRBV7S2A1N4TA0A589 114 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC160A6NGH7 325 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 MED24O75448 989 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 PDHA1P08559 390 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 KRT16P08779 473 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 CYP11B2P19099 503 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 PSMD2Q13200 908 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 BIRC2Q13490 618 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ABCB5Q2M3G0 1257 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 C6orf163Q5TEZ5 329 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 DCAF12L1Q5VU92 463 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 FMNL3Q8IVF7 1028 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 SYN2Q92777 582 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ZBTB10Q96DT7 871 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 PSTPIP2Q9H939 334 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ATP6V0A4Q9HBG4 840 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 SPON1Q9HCB6 807 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 NKIRAS1Q9NYS0 192 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 NUP188Q5SRE5 1749 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 EME2A4GXA9 379 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ATP2A1O14983 1001 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ZBTB39O15060 712 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 PLSCR1O15162 318 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 RPL21P46778 160 aaKnown RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 DRAP1Q14919 205 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 PTF1AQ7RTS3 328 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 CPXCR1Q8N123 301 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 BHMT2Q9H2M3 363 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 CNOT10Q9H9A5 744 aaKnown RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ZNF277Q9NRM2 450 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 DUOX1Q9NRD9 1551 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 MYO3BQ8WXR4 1341 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 CRKP46108 304 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 FXR2P51116 673 aaKnown RBP eCLIP7.48□□□□□ -1.219e-8■■□□□ 11.8
NEDD9-216ENST00000620854 SESN3P58005 492 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 COG2Q14746 738 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ARSHQ5FYA8 562 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 NSMFQ6X4W1 530 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 INTS8Q75QN2 995 aaKnown RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ATP8B4Q8TF62 1192 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 CHURC1Q8WUH1 139 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ARHGEF2Q92974 986 aaKnown RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 MXD3Q9BW11 206 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 SPZ1Q9BXG8 430 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 STMN4Q9H169 189 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-216ENST00000620854 ADAM7Q9H2U9 754 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 KCTD10Q9H3F6 313 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 SLITRK6Q9H5Y7 841 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 RGL1Q9NZL6 768 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 PI4KBQ9UBF8 816 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 C15orf41Q9Y2V0 281 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 CSADQ9Y600 493 aa7.48□□□□□ -1.21
NEDD9-216ENST00000620854 TMEM120BA0PK00 339 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 ANKRD63C9JTQ0 380 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 EXOC3O60645 756 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 GNA14O95837 355 aa7.47□□□□□ -1.21
NEDD9-216ENST00000620854 NMT1P30419 496 aaKnown RBP7.47□□□□□ -1.21
NEDD9-216ENST00000620854 SETDB1Q15047 1291 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms