RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SLC16A4O15374 487 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 TREHO43280 583 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 PRPF6O94906 941 aaKnown RBP8.84□□□□□ -0.99
CPNE3-209ENST00000620393 GCNT3O95395 438 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 TFRCP02786 760 aaKnown RBP8.84□□□□□ -0.99
CPNE3-209ENST00000620393 SRGAP2CP0DJJ0 459 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 MYBP10242 640 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 CCNE1P24864 410 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 ABCD1P33897 745 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 HOXD13P35453 343 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 NAMPTP43490 491 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 CLCN3P51790 818 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 CASP5P51878 434 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 NCKAP1LP55160 1127 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 ZNF200P98182 395 aaPredicted RBP8.84□□□□□ -0.99
CPNE3-209ENST00000620393 PAK1Q13153 545 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 TFDP1Q14186 410 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 KNOP1Q1ED39 458 aaKnown RBP8.84□□□□□ -0.99
CPNE3-209ENST00000620393 ZC2HC1CQ53FD0 456 aaPredicted RBP8.84□□□□□ -0.99
CPNE3-209ENST00000620393 FAM47CQ5HY64 1035 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 KLHL10Q6JEL2 608 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 FOXR2Q6PJQ5 311 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 KSR1Q8IVT5 923 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 SLC43A3Q8NBI5 491 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 TMEM161BQ8NDZ6 487 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 U2AF1L4Q8WU68 220 aaKnown RBP8.84□□□□□ -0.99
CPNE3-209ENST00000620393 NELFBQ8WX92 580 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 P2RX5Q93086 422 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 MED15Q96RN5 788 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 MAP7D2Q96T17 732 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 SEMA6BQ9H3T3 888 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 TMEM134Q9H6X4 195 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 CBX8Q9HC52 389 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 GTF2IRD1Q9UHL9 959 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
CPNE3-209ENST00000620393 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
CPNE3-209ENST00000620393 A0A1W2PQY0 241 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 BICDL2A1A5D9 508 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 FSD2A1L4K1 749 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 DENND3A2RUS2 1198 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 BECN2A8MW95 431 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 ARVCFO00192 962 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 IKBKBO14920 756 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 CYP2C9P11712 490 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 GJA8P48165 433 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 CDK7P50613 346 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 EFNA5P52803 228 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 STX17P56962 302 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 PTENP60484 403 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 KCNA1Q09470 495 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 CAPSQ13938 189 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 NCAPHQ15003 741 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 UVSSAQ2YD98 709 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 ARSIQ5FYB1 569 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 L1TD1Q5T7N2 865 aaKnown RBP8.83□□□□□ -1
CPNE3-209ENST00000620393 SPATA1Q5VX52 437 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 ANKRD40Q6AI12 368 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 GDF6Q6KF10 455 aaPredicted RBP8.83□□□□□ -1
CPNE3-209ENST00000620393 TAF2Q6P1X5 1199 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 RPAINQ86UA6 219 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 RHPN2Q8IUC4 686 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 DHX40Q8IX18 779 aaKnown RBP8.83□□□□□ -1
CPNE3-209ENST00000620393 RNF149Q8NC42 400 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 DEPTORQ8TB45 409 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 HVCN1Q96D96 273 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 ACCSQ96QU6 501 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 NFKBIZQ9BYH8 718 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 C2orf40Q9H1Z8 148 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 KCTD10Q9H3F6 313 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 TMEM206Q9H813 350 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 STARD7Q9NQZ5 370 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 ARHGAP28Q9P2N2 729 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 TBX20Q9UMR3 447 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 AKT3Q9Y243 479 aa8.83□□□□□ -1
CPNE3-209ENST00000620393 UBE4BO95155 1302 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 A0A0U1RQG5 324 aaPredicted RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 GOLGA6L3A6NEY3 463 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 LRRIQ4A6NIV6 560 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 K7ENM7 598 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 K7ERI5 159 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 PDXKO00764 312 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 TGFB1I1O43294 461 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 VTNP04004 478 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 RPLP2P05387 115 aaKnown RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 GPC3P51654 580 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 PMS1P54277 932 aaKnown RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 NLRP11P59045 1033 aaKnown RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 SNRPFP62306 86 aaKnown RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 MYL5Q02045 173 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 LRRC63Q05C16 580 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 PTGISQ16647 500 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 CDCA2Q69YH5 1023 aaPredicted RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 TTI2Q6NXR4 508 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 RUFY4Q6ZNE9 571 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 LUZP1Q86V48 1076 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 SERINC5Q86VE9 423 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 ZNF410Q86VK4 478 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 NELFCDQ8IXH7 590 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 SYCP3Q8IZU3 236 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 ANKLE1Q8NAG6 615 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms