RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ADCYAP1R1P41586 468 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 GTF2BQ00403 316 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 EMC2Q15006 297 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 XKR3Q5GH77 459 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 LMBRD2Q68DH5 695 aaPredicted RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 TAS1R3Q7RTX0 852 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 PRIMPOLQ96LW4 560 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ACCSQ96QU6 501 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 PHOX2BQ99453 314 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 DEF6Q9H4E7 631 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 PDLIM7Q9NR12 457 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ZNF215Q9UL58 517 aaPredicted RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 ZC3H4Q9UPT8 1303 aaKnown RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 MACROD2A1Z1Q3 448 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 DGAT1O75907 488 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 EDN1P05305 212 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 SRGAP2CP0DJJ0 459 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ARHGAP25P42331 645 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 SMTNP53814 917 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 NEDD9Q14511 834 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 MEA1Q16626 185 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 SLC39A4Q6P5W5 647 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 STXBP4Q6ZWJ1 553 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 DPP9Q86TI2 863 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 SEPT1Q8WYJ6 367 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 BICD1Q96G01 975 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 GPR20Q99678 358 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.51□□□□□ -1.05
NEK3-207ENST00000617054 MROH8Q9H579 483 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 ATP6V0A4Q9HBG4 840 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 TOPORSQ9NS56 1045 aaPredicted RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 DMAC2Q9NW81 257 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 IGSF9BQ9UPX0 1349 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
NEK3-207ENST00000617054 HNRNPDLO14979 420 aaKnown RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 ADRB2P07550 413 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 HARSP12081 509 aaKnown RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 UCHL3P15374 230 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 CASQ1P31415 396 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 NCKAP1LP55160 1127 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 PPP3CAQ08209 521 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 CELF3Q5SZQ8 465 aaKnown RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 DPY19L2P1Q6NXN4 242 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 PDXDC1Q6P996 788 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 METTL7BQ6UX53 244 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 GPR142Q7Z601 462 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 CDR2LQ86X02 465 aaPredicted RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 SLC35F6Q8N357 371 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 LENG1Q96BZ8 264 aaPredicted RBP8.51□□□□□ -1.05
NEK3-207ENST00000617054 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
NEK3-207ENST00000617054 AKR1B10O60218 316 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 GLRA2P23416 452 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 FMO5P49326 533 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 ARHGAP44Q17R89 818 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 CCDC122Q5T0U0 273 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 HGSNATQ68CP4 663 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 KIAA1328Q86T90 577 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 RDM1Q8NG50 284 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 POMGNT1Q8WZA1 660 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 GANQ9H2C0 597 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 EPC1Q9H2F5 836 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 AZI2Q9H6S1 392 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 ADAMTS1Q9UHI8 967 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 FAM184BQ9ULE4 1060 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 IVNS1ABPQ9Y6Y0 642 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 A0A0G2JMZ2 1700 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 EMSYQ7Z589 1322 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 A0A1W2PQJ5 194 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 ZNF286BP0CG31 522 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 DLATP10515 647 aaKnown RBP8.5□□□□□ -1.05
NEK3-207ENST00000617054 MAPTP10636 758 aaKnown RBP8.5□□□□□ -1.05
NEK3-207ENST00000617054 ACOT2P49753 483 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 KIF11P52732 1056 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 BFSP1Q12934 665 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 FIGNQ5HY92 759 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 KLHDC7AQ5VTJ3 777 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 SCARA3Q6AZY7 606 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 CCDC62Q6P9F0 684 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 FOXR2Q6PJQ5 311 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 METTL13Q8N6R0 699 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 SLC7A3Q8WY07 619 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 TMEM206Q9H813 350 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 SIX2Q9NPC8 291 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 HDAC6Q9UBN7 1215 aa8.5□□□□□ -1.05
NEK3-207ENST00000617054 IGKV6D-21A0A0A0MT36 114 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 CCP110O43303 1012 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 ADCY6O43306 1168 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 WNT7BP56706 349 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 MAP2K1Q02750 393 aaPredicted RBP8.49□□□□□ -1.05
NEK3-207ENST00000617054 ZBTB41Q5SVQ8 909 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 SFMBT2Q5VUG0 894 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 GBP6Q6ZN66 633 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 XXYLT1Q8NBI6 393 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 NPLOC4Q8TAT6 608 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 PRPF31Q8WWY3 499 aaKnown RBP8.49□□□□□ -1.05
NEK3-207ENST00000617054 KIFAP3Q92845 792 aa8.49□□□□□ -1.05
NEK3-207ENST00000617054 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
NEK3-207ENST00000617054 SPAG5Q96R06 1193 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms