RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TEX13BQ9BXU2 312 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 FAM198AQ9UFP1 575 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 BAIAP2L1Q9UHR4 511 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 TRPC6Q9Y210 931 aa6.07□□□□□ -1.44
SYNCRIP-204ENST00000616122 PFASO15067 1338 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SYNGAP1Q96PV0 1343 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 LRRD1A4D1F6 860 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SPDYE2BA6NHP3 402 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 PJA2O43164 708 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CYP26A1O43174 497 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 DGAT1O75907 488 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SPDYE6P0CI01 402 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 FDX1P10109 184 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 RARRES1P49788 294 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CXCL9Q07325 125 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SLMAPQ14BN4 828 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 TADA2BQ86TJ2 420 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CBWD2Q8IUF1 395 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 TEX2Q8IWB9 1127 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 THNSL1Q8IYQ7 743 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 PROCA1Q8NCQ7 364 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ARHGEF2Q92974 986 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 PDCD2LQ9BRP1 358 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 FGFBP2Q9BYJ0 223 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SEPT9Q9UHD8 586 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 GTF3C4Q9UKN8 822 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 XRN1Q8IZH2 1706 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 PODXLO00592 558 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 THAP12O43422 761 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 RFX1P22670 979 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 RXRBP28702 533 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 PRKCIP41743 596 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 HMGCS2P54868 508 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 MAGOHP61326 146 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 TFAMQ00059 246 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZKSCAN8Q15776 578 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CAPN12Q6ZSI9 719 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SPATS2Q86XZ4 545 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 EFCAB13Q8IY85 973 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 MGARPQ8TDB4 240 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 FBF1Q8TES7 1133 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 WRNIP1Q96S55 665 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 FAM213AQ9BRX8 229 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 MRIQ9BWK5 157 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 HEMGNQ9BXL5 484 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CELF4Q9BZC1 486 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 AS3MTQ9HBK9 375 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 GPRC5CQ9NQ84 441 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 NRBP2Q9NSY0 501 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 M0R2N6 131 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ACSL3O95573 720 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ITGB5P18084 799 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SFNP31947 248 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 NF2P35240 595 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ADCY1Q08828 1119 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 HGSNATQ68CP4 663 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 LMBRD2Q68DH5 695 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 FOXR2Q6PJQ5 311 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CCDC89Q8N998 374 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ATG4CQ96DT6 458 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 MXRA8Q9BRK3 442 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 NXF1Q9UBU9 619 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 FEM1BQ9UK73 627 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 BRWD1Q9NSI6 2320 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 VGLL3A8MV65 326 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 GOLGA8SH3BPF8 625 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 NFIBO00712 420 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 RNF8O76064 485 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CAP2P40123 477 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ERVK-9P63128 1117 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 LACTBP83111 547 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SNX1Q13596 522 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SWSAP1Q6NVH7 229 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZBTB8OSQ8IWT0 167 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 IQCKQ8N0W5 287 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 AGPAT1Q99943 283 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 WDR46O15213 610 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 CHRNA3P32297 505 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 MAGEA9P43362 315 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 JAK3P52333 1124 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 EPC2Q52LR7 807 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZNF772Q68DY9 489 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 HIBCHQ6NVY1 386 aaPredicted RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SV2AQ7L0J3 742 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 OTOP1Q7RTM1 612 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ARMC9Q7Z3E5 817 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 SLC35G2Q8TBE7 412 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 ERP44Q9BS26 406 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 TRIM51Q9BSJ1 452 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 DNAJC18Q9H819 358 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 MRPL47Q9HD33 250 aaKnown RBP6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 HSPBP1Q9NZL4 362 aa6.06□□□□□ -1.44
SYNCRIP-204ENST00000616122 BYSLQ13895 437 aaKnown RBP6.05□□□□□ -1.44
SYNCRIP-204ENST00000616122 TRIP13Q15645 432 aaPredicted RBP6.05□□□□□ -1.44
SYNCRIP-204ENST00000616122 SNRNP35Q16560 246 aaKnown RBP6.05□□□□□ -1.44
SYNCRIP-204ENST00000616122 SHROOM1Q2M3G4 852 aaPredicted RBP6.05□□□□□ -1.44
SYNCRIP-204ENST00000616122 KIAA1755Q5JYT7 1200 aa6.05□□□□□ -1.44
SYNCRIP-204ENST00000616122 CCT8L2Q96SF2 557 aa6.05□□□□□ -1.44
SYNCRIP-204ENST00000616122 SALL4Q9UJQ4 1053 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms