RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PSD3Q9NYI0 1048 aa15.11■□□□□ 0.01
SSBP2-220ENST00000615665 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
SSBP2-220ENST00000615665 REXO2Q9Y3B8 237 aaKnown RBP15.11■□□□□ 0.01
SSBP2-220ENST00000615665 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
SSBP2-220ENST00000615665 SLIT2O94813 1529 aa15.11■□□□□ 0.01
SSBP2-220ENST00000615665 CAP2P40123 477 aa15.11■□□□□ 0.01
SSBP2-220ENST00000615665 EIF3BP55884 814 aaKnown RBP15.11■□□□□ 0.01
SSBP2-220ENST00000615665 MRRFQ96E11 262 aaKnown RBP15.11■□□□□ 0.01
SSBP2-220ENST00000615665 RNPC3Q96LT9 517 aaKnown RBP15.11■□□□□ 0.01
SSBP2-220ENST00000615665 MRIQ9BWK5 157 aa15.11■□□□□ 0.01
SSBP2-220ENST00000615665 OLFML3Q9NRN5 406 aa15.11■□□□□ 0.01
SSBP2-220ENST00000615665 PCDHAC2Q9Y5I4 1007 aa15.11■□□□□ 0.01
SSBP2-220ENST00000615665 MEIS2O14770 477 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 CARSP49589 748 aaKnown RBP15.1■□□□□ 0.01
SSBP2-220ENST00000615665 MGARPQ8TDB4 240 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 PPP1R11O60927 126 aaPredicted RBP15.1■□□□□ 0.01
SSBP2-220ENST00000615665 IFNB1P01574 187 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 GKAP1Q5VSY0 366 aaPredicted RBP15.1■□□□□ 0.01
SSBP2-220ENST00000615665 ZNF564Q8TBZ8 553 aaPredicted RBP15.1■□□□□ 0.01
SSBP2-220ENST00000615665 FERMT1Q9BQL6 677 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 MRPL47Q9HD33 250 aaKnown RBP15.1■□□□□ 0.01
SSBP2-220ENST00000615665 DMGDHQ9UI17 866 aaKnown RBP15.1■□□□□ 0.01
SSBP2-220ENST00000615665 ANAPC7Q9UJX3 599 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
SSBP2-220ENST00000615665 M0R2N6 131 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 MUTP22033 750 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 SLC30A10Q6XR72 485 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 AMIGO3Q86WK7 504 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 MSTO1Q9BUK6 570 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 KIAA1586Q9HCI6 787 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 AIPL1Q9NZN9 384 aa15.1■□□□□ 0.01
SSBP2-220ENST00000615665 PODXLO00592 558 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 RAD51CO43502 376 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 ICAM1P05362 532 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 SLFN12LQ6IEE8 588 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 ANKRD42Q8N9B4 389 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 FBXL13Q8NEE6 735 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 NUP85Q9BW27 656 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 RCCD1A6NED2 376 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 DAPK3O43293 454 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 TMEM253P0C7T8 217 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 BAATQ14032 418 aaPredicted RBP15.09■□□□□ 0.01
SSBP2-220ENST00000615665 EZH2Q15910 746 aaKnown RBP15.09■□□□□ 0.01
SSBP2-220ENST00000615665 SLC15A2Q16348 729 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 KAZNQ674X7 775 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 ZNF571Q7Z3V5 609 aaPredicted RBP15.09■□□□□ 0.01
SSBP2-220ENST00000615665 BBOF1Q8ND07 529 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 INTUQ9ULD6 942 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 CYP3A7-CYP3A51PA0A087WV96 503 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 CYP3A7P24462 503 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 LACTBP83111 547 aaPredicted RBP15.09■□□□□ 0.01
SSBP2-220ENST00000615665 SLMAPQ14BN4 828 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 SLC35G1Q2M3R5 365 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.09■□□□□ 0.019e-7■■■■■ 60.5
SSBP2-220ENST00000615665 ZNF148Q9UQR1 794 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 GINS2Q9Y248 185 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 CYP26A1O43174 497 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 TMOD1P28289 359 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 ECM1Q16610 540 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 ZNF662Q6ZS27 426 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 SULF1Q8IWU6 871 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 TPCN2Q8NHX9 752 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 CAPN7Q9Y6W3 813 aa15.09■□□□□ 0.01
SSBP2-220ENST00000615665 STXBP2Q15833 593 aa15.08■□□□□ 0.01
SSBP2-220ENST00000615665 EEPD1Q7L9B9 569 aa15.08■□□□□ 0.01
SSBP2-220ENST00000615665 AGBL3Q8NEM8 1001 aa15.08■□□□□ 0.01
SSBP2-220ENST00000615665 LAMA4Q16363 1823 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 EML1O00423 815 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 PJA2O43164 708 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 POLR2BP30876 1174 aaKnown RBP15.08■□□□□ 0
SSBP2-220ENST00000615665 PLA2G4FQ68DD2 849 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 PPP1R2P3Q6NXS1 205 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 ZNF720Q7Z2F6 126 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
SSBP2-220ENST00000615665 VPS37BQ9H9H4 285 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 RTN2O75298 545 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 STAM2O75886 525 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 KRT15P19012 456 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 TEX2Q8IWB9 1127 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 CCDC89Q8N998 374 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 ATP6V1G3Q96LB4 118 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 POLR3FQ9H1D9 316 aaPredicted RBP15.08■□□□□ 0
SSBP2-220ENST00000615665 INTS9Q9NV88 658 aaKnown RBP15.08■□□□□ 0
SSBP2-220ENST00000615665 HOXC10Q9NYD6 342 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 SUCLA2Q9P2R7 463 aaPredicted RBP15.08■□□□□ 0
SSBP2-220ENST00000615665 IVNS1ABPQ9Y6Y0 642 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 PLIN4Q96Q06 1357 aa15.08■□□□□ 0
SSBP2-220ENST00000615665 MYO1CO00159 1063 aa15.07■□□□□ 0
SSBP2-220ENST00000615665 NDC80O14777 642 aa15.07■□□□□ 0
SSBP2-220ENST00000615665 LDHAP00338 332 aaKnown RBP15.07■□□□□ 0
SSBP2-220ENST00000615665 HNRNPH3P31942 346 aaKnown RBP15.07■□□□□ 0
SSBP2-220ENST00000615665 ZRSR2Q15696 482 aaKnown RBP15.07■□□□□ 0
SSBP2-220ENST00000615665 UAP1Q16222 522 aaPredicted RBP15.07■□□□□ 0
SSBP2-220ENST00000615665 SNRNP35Q16560 246 aaKnown RBP15.07■□□□□ 0
SSBP2-220ENST00000615665 OTOP1Q7RTM1 612 aa15.07■□□□□ 0
SSBP2-220ENST00000615665 EFCAB13Q8IY85 973 aa15.07■□□□□ 0
SSBP2-220ENST00000615665 GPD1LQ8N335 351 aa15.07■□□□□ 0
SSBP2-220ENST00000615665 ACAD9Q9H845 621 aa15.07■□□□□ 0
SSBP2-220ENST00000615665 FBXL5Q9UKA1 691 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms