RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 TTC41PQ6P2S7 1318 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 A0A0D9SFI3 127 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 A0A0U1RQF3 1178 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 B4E1Z4 1266 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 MEIS2O14770 477 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 HRO43593 1189 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 KCNK5O95279 499 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 TOP3BO95985 862 aaKnown RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 SPATA31D3P0C874 917 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 SPINK2P20155 84 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 RPS9P46781 194 aaKnown RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 LIMK1P53667 647 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 ACTR2P61160 394 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 SRSF5Q13243 272 aaKnown RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 SOWAHCQ53LP3 525 aaPredicted RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 RSPO2Q6UXX9 243 aaPredicted RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 CYP26C1Q6V0L0 522 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 SPATA31D4Q6ZUB0 917 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 IQCA1Q86XH1 822 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 ZNF687Q8N1G0 1237 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 MRPL9Q9BYD2 267 aaKnown RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 AZI2Q9H6S1 392 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 JPH1Q9HDC5 661 aaPredicted RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 HELLSQ9NRZ9 838 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 FAM217BQ9NTX9 383 aaPredicted RBP7.86□□□□□ -1.15
MUC1-227ENST00000615517 TBC1D13Q9NVG8 400 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.86□□□□□ -1.15
MUC1-227ENST00000615517 ZSWIM5Q9P217 1185 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 SLC9A2Q9UBY0 812 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 DDX19BQ9UMR2 479 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 UBIAD1Q9Y5Z9 338 aa7.86□□□□□ -1.15
MUC1-227ENST00000615517 CACNA1EQ15878 2313 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 SHROOM3Q8TF72 1996 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 IGKV6D-21A0A0A0MT36 114 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 PNMA6FA0A0J9YX94 578 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 MEIS3P2A8K0S8 358 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 TEX28O15482 410 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 ATG7O95352 703 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 C22orf31O95567 290 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 ZSCAN20P17040 1043 aaPredicted RBP7.85□□□□□ -1.15
MUC1-227ENST00000615517 ATP4AP20648 1035 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 FGFR4P22455 802 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 MTMR1Q13613 665 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 SF3A2Q15428 464 aaKnown RBP7.85□□□□□ -1.15
MUC1-227ENST00000615517 CCDC6Q16204 474 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 LONRF3Q496Y0 759 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 CCDC178Q5BJE1 867 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 TPRG1Q6ZUI0 275 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 TAS1R1Q7RTX1 841 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 ZNF280BQ86YH2 543 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 SMARCC2Q8TAQ2 1214 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 GATA6Q92908 595 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 TNPO1Q92973 898 aaKnown RBP7.85□□□□□ -1.15
MUC1-227ENST00000615517 LPPQ93052 612 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 CDHR1Q96JP9 859 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 LSM14BQ9BX40 385 aaKnown RBP7.85□□□□□ -1.15
MUC1-227ENST00000615517 NT5C3AQ9H0P0 336 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 ADAMTS10Q9H324 1103 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 RNF41Q9H4P4 317 aaPredicted RBP7.85□□□□□ -1.15
MUC1-227ENST00000615517 DCTPP1Q9H773 170 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 JADE2Q9NQC1 790 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 UNC79Q9P2D8 2635 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 FREM2Q5SZK8 3169 aa7.85□□□□□ -1.15
MUC1-227ENST00000615517 COL1A2P08123 1366 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 ACACAQ13085 2346 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 TMEM8BA6NDV4 472 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 PIK3CDO00329 1044 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 C2CD2LO14523 706 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 GIPC1O14908 333 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 HBP1O60381 514 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 DDHD2O94830 711 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 NRLP54845 237 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 SIM2Q14190 667 aaPredicted RBP7.84□□□□□ -1.15
MUC1-227ENST00000615517 SEC23AQ15436 765 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 MCMDC2Q4G0Z9 681 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 AASDHQ4L235 1098 aaPredicted RBP7.84□□□□□ -1.15
MUC1-227ENST00000615517 PSAPL1Q6NUJ1 521 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 MAMSTRQ6ZN01 415 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 ZNF668Q96K58 619 aaPredicted RBP7.84□□□□□ -1.15
MUC1-227ENST00000615517 ADAM33Q9BZ11 813 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 GBP3Q9H0R5 595 aa7.84□□□□□ -1.15
MUC1-227ENST00000615517 MRPL17Q9NRX2 175 aaKnown RBP7.84□□□□□ -1.15
MUC1-227ENST00000615517 CELSR3Q9NYQ7 3312 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 KIF26AQ9ULI4 1882 aaPredicted RBP7.83□□□□□ -1.16
MUC1-227ENST00000615517 CHURC1-FNTBB4DL54 471 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 OFD1O75665 1012 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 EFEMP2O95967 443 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 CCNE2O96020 404 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 GLUD1P00367 558 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 EIF4BP23588 611 aaKnown RBP7.83□□□□□ -1.16
MUC1-227ENST00000615517 FSHRP23945 695 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 HOXC13P31276 330 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 FNTBP49356 437 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 CLCN3P51790 818 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 AK2P54819 239 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 NLRP11P59045 1033 aaKnown RBP7.83□□□□□ -1.16
MUC1-227ENST00000615517 NTHL1P78549 312 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 ADCY1Q08828 1119 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 FOXC1Q12948 553 aa7.83□□□□□ -1.16
MUC1-227ENST00000615517 TRAF1Q13077 416 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms