RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TXKP42681 527 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 LNPEPQ9UIQ6 1025 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 SUGT1Q9Y2Z0 365 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZNF711Q9Y462 761 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 CCNT1O60563 726 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 IL9RQ01113 521 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 CHRNDQ07001 517 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 CENPPQ6IPU0 288 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 SRBD1Q8N5C6 995 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 CTNNBL1Q8WYA6 563 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 HAUS1Q96CS2 278 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 C18orf8Q96DM3 657 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 SMC6Q96SB8 1091 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 EDEM3Q9BZQ6 932 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM163BP0C2L3 166 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 STRN3Q13033 797 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 PARP6Q2NL67 630 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 WASHC2DQ5SRD0 308 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 LRRC74BQ6ZQY2 392 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ATL2Q8NHH9 583 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 LRMDAQ9H2I8 198 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ETNK2Q9NVF9 386 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 USP54Q70EL1 1684 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 MYO5AQ9Y4I1 1855 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 SPAG7O75391 227 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 CCNB1P14635 433 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 VPS41P49754 854 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 MGAT5Q09328 741 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ALX1Q15699 326 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ATP8B4Q8TF62 1192 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 CKAP2Q8WWK9 683 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 RUNDC3BQ96NL0 473 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 CCDC134Q9H6E4 229 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZFP69BQ9UJL9 534 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ROBO1Q9Y6N7 1651 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 RBAK-RBAKDNI3L0D1 243 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 RIPK2O43353 540 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 TMCC1O94876 653 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 SKIV2L2P42285 1042 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 POLGP54098 1239 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 FKBP3Q00688 224 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 DCAF17Q5H9S7 520 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 PHLDB3Q6NSJ2 640 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 RFWD3Q6PCD5 774 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZNF571Q7Z3V5 609 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZNF34Q8IZ26 560 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 PTPRN2Q92932 1015 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 DCTN4Q9UJW0 460 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 NAGPAQ9UK23 515 aa11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-208ENST00000615468 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 DCTN3O75935 186 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CSF1RP07333 972 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CALM1P0DP23 149 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CALM2P0DP24 149 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CALM3P0DP25 149 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 RASA1P20936 1047 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CYP7A1P22680 504 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 BPIFB4P59827 614 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 TRIM28Q13263 835 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 MPP3Q13368 585 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 RASGRF1Q13972 1273 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 SEPT7Q16181 437 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM47AQ5JRC9 791 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 DUPD1Q68J44 220 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 MYOCDQ8IZQ8 938 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CLMNQ96JQ2 1002 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 ASIC3Q9UHC3 531 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CFAP69A5D8W1 941 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CES2O00748 559 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 TXNDC9O14530 226 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 GYG2O15488 501 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 NMT2O60551 498 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 OAS1P00973 400 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 RPL21P46778 160 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 MFSD4BQ5TF39 518 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 RNF43Q68DV7 783 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 GLIS3Q8NEA6 775 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 CEP70Q8NHQ1 597 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 TTC1Q99614 292 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 YIPF2Q9BWQ6 316 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 ADAM33Q9BZ11 813 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 EPB41L4BQ9H329 900 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 ERVK-5Q9HDB9 667 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 OSGEPQ9NPF4 335 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 TMCO1Q9UM00 188 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms