RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 LPXNO60711 386 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 F13A1P00488 732 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 ATF7P17544 494 aaPredicted RBP18.54■□□□□ 0.56
CBWD3-211ENST00000615061 HOXA11P31270 313 aaPredicted RBP18.54■□□□□ 0.56
CBWD3-211ENST00000615061 UBA7P41226 1012 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 LONRF3Q496Y0 759 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 TWF2Q6IBS0 349 aaKnown RBP18.54■□□□□ 0.56
CBWD3-211ENST00000615061 RINT1Q6NUQ1 792 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 EPSTI1Q96J88 318 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 CDK5RAP3Q96JB5 506 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 NT5C3AQ9H0P0 336 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 CHST12Q9NRB3 414 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 HCSTQ9UBK5 93 aa18.54■□□□□ 0.56
CBWD3-211ENST00000615061 A0A0U1RQF3 1178 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 SSBP05455 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 SLC39A14Q15043 492 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 EPC2Q52LR7 807 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 IFNLR1Q8IU57 520 aaPredicted RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 RNF19AQ9NV58 838 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 DACT1Q9NYF0 836 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 SRPRBQ9Y5M8 271 aaKnown RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 MRPL42Q9Y6G3 142 aaKnown RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 TBKBP1A7MCY6 615 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 MEIS3P2A8K0S8 358 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 B4GALT5O43286 388 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 TSPAN1O60635 241 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 POU5F1BQ06416 359 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 RAD51AP2Q09MP3 1159 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 AMHR2Q16671 573 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 FAM43BQ6ZT52 329 aaPredicted RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 C1orf186Q6ZWK4 172 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 ZNF598Q86UK7 904 aaKnown RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 TMEM192Q8IY95 271 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 DAW1Q8N136 415 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 MAFAQ8NHW3 353 aaPredicted RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 CPB2Q96IY4 423 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 KIFC3Q9BVG8 833 aa18.53■□□□□ 0.56
CBWD3-211ENST00000615061 ELAC1Q9H777 363 aaKnown RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 DAXXQ9UER7 740 aaPredicted RBP18.53■□□□□ 0.56
CBWD3-211ENST00000615061 ERLIN2O94905 339 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 PLA2G4BP0C869 781 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 PLCG1P19174 1290 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 NASPP49321 788 aaPredicted RBP18.52■□□□□ 0.55
CBWD3-211ENST00000615061 CMTR2Q8IYT2 770 aaKnown RBP18.52■□□□□ 0.55
CBWD3-211ENST00000615061 FBXO22Q8NEZ5 403 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 PPM1EQ8WY54 764 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 LPPQ93052 612 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 NFKBIZQ9BYH8 718 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 FAM105AQ9NUU6 356 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 USP20Q9Y2K6 914 aa18.52■□□□□ 0.55
CBWD3-211ENST00000615061 HIP1RO75146 1068 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 SLC12A3P55017 1021 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 MAPK7Q13164 816 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 DHX8Q14562 1220 aaKnown RBP18.51■□□□□ 0.55
CBWD3-211ENST00000615061 UBXN11Q5T124 520 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 CDCA2Q69YH5 1023 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-211ENST00000615061 CDR2LQ86X02 465 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-211ENST00000615061 SYT2Q8N9I0 419 aaPredicted RBP18.51■□□□□ 0.55
CBWD3-211ENST00000615061 LINC00301Q8NCQ3 95 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 SYMPKQ92797 1274 aaKnown RBP18.51■□□□□ 0.55
CBWD3-211ENST00000615061 CLP1Q92989 425 aaKnown RBP18.51■□□□□ 0.55
CBWD3-211ENST00000615061 CALML4Q96GE6 196 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 BLOC1S4Q9NUP1 217 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 ZDHHC9Q9Y397 364 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 TCHHQ07283 1943 aa18.51■□□□□ 0.55
CBWD3-211ENST00000615061 NPHP3-ACAD11A0A0J9YXS1 232 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 TTLL13PA6NNM8 815 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 SFI1A8K8P3 1242 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 ARF4P18085 180 aaPredicted RBP18.5■□□□□ 0.55
CBWD3-211ENST00000615061 CTNNB1P35222 781 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
CBWD3-211ENST00000615061 STK38Q15208 465 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 CCDC85BQ15834 202 aaPredicted RBP18.5■□□□□ 0.55
CBWD3-211ENST00000615061 CLLU1OSQ5K130 101 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 MICALL1Q8N3F8 863 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 RASSF8Q8NHQ8 419 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 KIFAP3Q92845 792 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
CBWD3-211ENST00000615061 CASD1Q96PB1 797 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 TRAIPQ9BWF2 469 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 CCSER1Q9C0I3 900 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 MTCH2Q9Y6C9 303 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 ATG2AQ2TAZ0 1938 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 EDN1P05305 212 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 BMPR1AP36894 532 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 NAMPTP43490 491 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 HELQQ8TDG4 1101 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 CHAMP1Q96JM3 812 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 EIF2AQ9BY44 585 aaKnown RBP18.5■□□□□ 0.55
CBWD3-211ENST00000615061 PCDHB2Q9Y5E7 798 aa18.5■□□□□ 0.55
CBWD3-211ENST00000615061 PDIA4P13667 645 aaKnown RBP18.49■□□□□ 0.55
CBWD3-211ENST00000615061 LIG1P18858 919 aa18.49■□□□□ 0.55
CBWD3-211ENST00000615061 MCM6Q14566 821 aa18.49■□□□□ 0.55
CBWD3-211ENST00000615061 ARSHQ5FYA8 562 aa18.49■□□□□ 0.55
CBWD3-211ENST00000615061 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
CBWD3-211ENST00000615061 KRI1Q8N9T8 703 aaKnown RBP18.49■□□□□ 0.55
CBWD3-211ENST00000615061 SAMD11Q96NU1 681 aa18.49■□□□□ 0.55
CBWD3-211ENST00000615061 TYW1Q9NV66 732 aaKnown RBP18.49■□□□□ 0.55
CBWD3-211ENST00000615061 SPTLC2O15270 562 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms