RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 CDHR1Q96JP9 859 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ZBED2Q9BTP6 218 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SPZ1Q9BXG8 430 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 PPP1R12CQ9BZL4 782 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 TMEM206Q9H813 350 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 AGO2Q9UKV8 859 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 ARHGEF28Q8N1W1 1705 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 PPLO60437 1756 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 DEPDC5O75140 1603 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SERPING1P05155 500 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 YY1P25490 414 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 DPYDQ12882 1025 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 GNASQ5JWF2 1037 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ILDR1Q86SU0 546 aaPredicted RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 SCYL1Q96KG9 808 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 AGAP3Q96P47 875 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CBWD1Q9BRT8 395 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 NUCKS1Q9H1E3 243 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 BAIAP2L1Q9UHR4 511 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 COL3A1P02461 1466 aaPredicted RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 A0A0U1RQJ8 604 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 M0QYV0 167 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ZNF286BP0CG31 522 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 LMNB1P20700 586 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 RCN2Q14257 317 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 LRRC14Q15048 493 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SEC23AQ15436 765 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ZSCAN26Q16670 478 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 WHAMMP3Q1A5X7 153 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SPOPLQ6IQ16 392 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 FAM20AQ96MK3 541 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CEP63Q96MT8 703 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SMC6Q96SB8 1091 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 NOVA2Q9UNW9 492 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 TPRP12270 2363 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 SPTBN2O15020 2390 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 GOLGA8RI6L899 631 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 PGRMC1O00264 195 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 RNF40O75150 1001 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 GYPCP04921 128 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 VCAM1P19320 739 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 TTLL4Q14679 1199 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 PTPAQ15257 358 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 LY6KQ17RY6 165 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 APOBEC3HQ6NTF7 200 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 C1orf228Q6PIY5 440 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 HHIPL2Q6UWX4 724 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 FAM47EQ6ZV65 393 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 APOBEC3FQ8IUX4 373 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 HACE1Q8IYU2 909 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SIX6OS1Q8N1H7 587 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 NUP85Q9BW27 656 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 FHDC1Q9C0D6 1143 aaPredicted RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 SH3GLB2Q9NR46 395 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.08□□□□□ -1.76
LTN1-207ENST00000614971 DISP2A7MBM2 1401 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 MYO3BQ8WXR4 1341 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CROCCQ5TZA2 2017 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CIITAP33076 1130 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SHMT1P34896 483 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CAP2P40123 477 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 FAM182AQ5T1J6 154 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 RAPH1Q70E73 1250 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 KCNK18Q7Z418 384 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 CCDC170Q8IYT3 715 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 OR6J1Q8NGC5 347 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 UBA3Q8TBC4 463 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 ALKBH8Q96BT7 664 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 ZMYND12Q9H0C1 365 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 NSRP1Q9H0G5 558 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 UNC45AQ9H3U1 944 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 GINM1Q9NU53 330 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 SUCLA2Q9P2R7 463 aaPredicted RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 ODF2LQ9ULJ1 636 aa4.08□□□□□ -1.76
LTN1-207ENST00000614971 PRG3Q9Y2Y8 225 aaPredicted RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.08□□□□□ -1.76
LTN1-207ENST00000614971 CAMTA1Q9Y6Y1 1673 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 KAT6AQ92794 2004 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 GVINP1Q7Z2Y8 2422 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 GNA15P30679 374 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 POLR2BP30876 1174 aaKnown RBP4.07□□□□□ -1.76
LTN1-207ENST00000614971 BCAR1P56945 870 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 PDE1BQ01064 536 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 IFT88Q13099 833 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 PDCLQ13371 301 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 SBK1Q52WX2 424 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 PRAMEF19Q5SWL8 479 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 CYP4A22Q5TCH4 519 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 CBWD2Q8IUF1 395 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 SH2D3CQ8N5H7 860 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 DHX38Q92620 1227 aaKnown RBP4.07□□□□□ -1.76
LTN1-207ENST00000614971 ZBTB10Q96DT7 871 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 PPP1R36Q96LQ0 422 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 INTS2Q9H0H0 1204 aaKnown RBP4.07□□□□□ -1.76
LTN1-207ENST00000614971 RAB17Q9H0T7 212 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 HSPBP1Q9NZL4 362 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 AGAP1Q9UPQ3 857 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 FER1L4A9Z1Z3 1794 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 CLTAP09496 248 aa4.07□□□□□ -1.76
LTN1-207ENST00000614971 SRGAP2BP0DMP2 458 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms